Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | NIGDRMDSIPEYSKKFELSVGTIQKAIKFLEDEKMVTLERKGHMGTTV |
1 | 6az6A1 | 0.20 | 0.19 | 6.02 | 2.13 | SPARKS-K | | PVGAKLPNEYELAEDLDVGRSTIREAVRSLATRNIL--EVRQGSGTYI |
2 | 4zs8A1 | 0.24 | 0.23 | 7.15 | 1.13 | FFAS-3D | | TPGTPVPPERTLAAEFDTSRTTVRQALQELVVEGRLE--RIQGKGTFV |
3 | 2wv0D | 0.28 | 0.27 | 8.27 | 1.27 | HHpred | | QPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLY--RLKGRGTFV |
4 | 5kvrA | 0.26 | 0.25 | 7.71 | 1.93 | MUSTER | | RPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRR--QGGGTFV |
5 | 3bwgA | 0.28 | 0.27 | 8.27 | 0.99 | CNFpred | | QQGDKLPVLETLMAQFEVSKSTITKSLELLEQKGAIFQVR--GSGIFV |
6 | 2wv0D | 0.28 | 0.27 | 8.27 | 0.58 | HHsearch-2 | | QPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLY--RLKGRGTFV |
7 | 4zs8A1 | 0.28 | 0.27 | 8.27 | 2.41 | Neff-PPAS | | TPGTPVPPERTLAAEFDTSRTTVRQALQELVVEGR--LERIQGKGTFV |
8 | 4zs8A | 0.22 | 0.21 | 6.56 | 0.95 | HHsearch | | TPGTPVPPERTLAAEFDTSRTTVRQALQELVVEGRLE--RIQGKGTF- |
9 | 6az6A1 | 0.17 | 0.17 | 5.46 | 0.64 | PROSPECTOR2 | | PVGAKLPNEYELAEDLDVGRSTIREAVRSLATRNILE--VRQGSGTYI |
10 | 4zs8A | 0.24 | 0.23 | 7.12 | 0.76 | SAM | | -PGTPVPPERTLAAEFDTSRTTVRQALQELVVEGRLE--RIQGKGTFV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|