Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FRHQNYGVPWTPGETRQVWDVEARIEFNANGGEVKASLAAPHTQKGYTLIGESASSPGYGVSYVNSDSGRRAEWSIRQATGAQTIYYKAQFLVDPQAKVDEQPPTGEIAKPTLSAPQQAAANALIERAMSRSADNETFARELIKTLNDPDSQNAALILND |
1 | 3isrB | 0.07 | 0.06 | 2.59 | 1.57 | HHsearch-2 | | ----------LYFQSNAKFKIHSDITYQV--SPTTFIFNVALRTESQHILDESLIPPIEIEEFSYSGTSRFVRLKA--TENTTFSSYTATVDTQYKVDQPVGDIIPFLFPSRYCQSD--KLQKLAYKEFGKIENVYSKVLAITDWIGSNSQTSAFDTITE |
2 | 3isrB | 0.07 | 0.06 | 2.58 | 2.42 | HHsearch | | ----------LYFQSNAKFKIHSDITYQV--SPTTFIFNVALRTESQHILDESLIPPIEIEEFSYSGTSRFVRLKA--TENTTFSSYTATVDTQYKVDQPVGDIIPFLFPSRYCQSD--KLQKLAYKEFGKIENVYSKVLAITDWIGSNSQTSAFDTIT- |
3 | 3tfzA | 0.08 | 0.07 | 2.73 | 0.87 | SPARKS-K | | YADIFPPTEKVEILEEGQGYQVVRLHVDVAGEINTWTSRRLDPARRVIAYRQLETAPIV--------GHMSGEWRAFTLAERTQLVLTHDFVTRAAG--DDGLVAGKLT-------PDEAREMLEAVVERNSVADLNAVLGEAERRVRAAGGVGTV---- |
4 | 4qxzA | 0.14 | 0.09 | 3.22 | 0.68 | FFAS-3D | | FKAVRFEYELEDEESGTGWLLEIVISYQDNEQLLDIRVVITRPANDPALFESTVK-------------------SIKNFKTTMSIVFECHIYTLRQQ----------------------YAESLLEQLIDDGLSGEELKKSFNRMMQSKPK--------- |
5 | 3isrB | 0.07 | 0.06 | 2.58 | 0.90 | HHpred | | ------------FQSNAKFKIHSDITYQV--SPTTFIFNVALRTESQHILDESLIPPIEIEEFSYSGTSRFVRLKA--TENTTFSSYTATVDTQYKVDQPVGDIIPFLFPSRYCQSD--KLQKLAYKEFGKIENVYSKVLAITDWIGSNSQTSAFDTITE |
6 | 2okxA | 0.11 | 0.11 | 4.04 | 0.80 | MUSTER | | SGVVTLGFPTGVRGSGVWVDGVLQTEWTGVQPERYYSLNLAAGEHLVLVDITSSDHGGSSHFAIDSEAAFTLRSPAGDNGVPLATIGTFDQSEYIDHRPGRRMQTDHPEAAPTAAALEAFASWVKPFEPSLYTEENVFGSNVWRTLARAVPRSVLNAILP |
7 | 3isrA | 0.08 | 0.07 | 2.71 | 0.81 | CNFpred | | ---------------AMKFKIHSDITYQVM-SPTTFIFNVALRTESQHILDESLIVT-IEIEEFSYGTSRFVRLKATE-NTTFSMSYTATVDTQY-KVIDQRQELETVPVVDLDGDIIP-LQKLAYKEFGKIENVYSKVLAITDWIYN----NVEYISGS |
8 | 5azwA | 0.12 | 0.06 | 2.21 | 0.32 | HHsearch-2 | | ----GYFVSIDAHAEECFFERKMGLIFEVGFLDIDVEITGPDN---KGIYKGDRESSGYTFAAH-MDGTYKFCFSNRMSMTPKIVMFTIDIG-------------------------------------------------------------------- |
9 | 2d4rA | 0.09 | 0.07 | 2.62 | 0.74 | Neff-PPAS | | RAERYIPAPYLK------EVESLEVVAREGA-RTRSRWVAVAGKKVRWLEEEEWDDENLRNRFFSPEDRYEGTWVFLPEGEGTRVVLTLTYEL----TIPIFGGLLRKLVQKLQENVESLLKGLEERVLAASS--------------------------- |
10 | 3l81A1 | 0.14 | 0.09 | 2.99 | 0.54 | HHsearch | | PLPFRL-FPSVRGSGRLQVYLKLRCDLLSQALNVRLHLPLPRGVVSLSQEL---SSPEQKAEL----AEGALRWDLPRVQGGSQLSGLFQMDVPGPP--G-LGLGP-AS-LSFE---------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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