>PF14349 (519 residues) EFLTSIQGKVNPAVFDSIWNDPANDNYHYFRGRDYDQMRASILRRYKYINNPQGNSPDSE SRDESYDTSYKTMPDVEDINQDYTLNEYEKYFQYRVSIRPEDLVVGRNFIVDKRIASPKL RNGKTEEVTWYLFRIPLSDYEDKVGSISDFTSIRFMRMFMTGFKHPIILRFGSLDLVRGD WRVYDQNLDNSATQQGKLAVSAVNIEENNDKTPVNYVLPPGIRRGQDPQQPQLVEDNEQS LALTVTDLGSGESKAVYKNTTLDLRQYKRLQMFVHANMMEPNVTNLQDNQLAVFIRLGSD YKSNYYEYEIPLKLTPNGNNYDKYSRADCEMVWPEENMLDIPLNVFTALKKARNKAKSEG RASYNRVFSAYDDDKPANKISVMGNPTLGEVKTMIIGVRNNSGEIKSGEIWVNELRLREY NNEGGWAAQGNLNVQLSDLGSVNVQGRYISDGFGGLEDGVAQRSTDDYKTYSITANIELG KFFPEKAKVSAPLYYSITKEFTRPRYNPLDTDMELDDAL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EFLTSIQGKVNPAVFDSIWNDPANDNYHYFRGRDYDQMRASILRRYKYINNPQGNSPDSESRDESYDTSYKTMPDVEDINQDYTLNEYEKYFQYRVSIRPEDLVVGRNFIVDKRIASPKLRNGKTEEVTWYLFRIPLSDYEDKVGSISDFTSIRFMRMFMTGFKHPIILRFGSLDLVRGDWRVYDQNLDNSATQQGKLAVSAVNIEENNDKTPVNYVLPPGIRRGQDPQQPQLVEDNEQSLALTVTDLGSGESKAVYKNTTLDLRQYKRLQMFVHANMMEPNVTNLQDNQLAVFIRLGSDYKSNYYEYEIPLKLTPNGNNYDKYSRADCEMVWPEENMLDIPLNVFTALKKARNKAKSEGRASYNRVFSAYDDDKPANKISVMGNPTLGEVKTMIIGVRNNSGEIKSGEIWVNELRLREYNNEGGWAAQGNLNVQLSDLGSVNVQGRYISDGFGGLEDGVAQRSTDDYKTYSITANIELGKFFPEKAKVSAPLYYSITKEFTRPRYNPLDTDMELDDAL | |||||||||||||||||||
1 | 6h3iA | 0.38 | 0.36 | 10.63 | 5.59 | SPARKS-K | KNQDVGLDGLPSSREGSIY----GDDYTYYLNAD-----GGVLERYKNYNGTEGNSAVSINDP---NRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKPG-MQVGENYITDIREVTVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLDD----GVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIGGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESLPN-QPTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTGGSC----SISPDLVWMDDNSIDLALDLLTRMKIKAMSIDINSSKRDVNGIYY---PDGKLTLGIKGNPNFGLVRNLMVGVKSRDHKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLI | |||||||||||||
2 | 6h3iA | 0.38 | 0.36 | 10.55 | 4.11 | FFAS-3D | ---------------SSREGSIYGDDYTYYLNAD-----GGVLERYKNYNGTEGNSAVSIND---PNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKPG-MQVGENYITDIREVTVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLDD----GVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIAGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESLPNQ-PTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTG----GSCSISPDLVWMDDNSIDLALDLLTRMKIKAMSIDINSSKRDVNGIYY---PDGKLTLGIKGNPNFGLVRNLMVGVKSADHKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLI | |||||||||||||
3 | 6h3iA | 0.38 | 0.36 | 10.67 | 18.98 | HHpred | ----KNQDVLPSSREGSIY----GDDYTYYLNA-----DGGVLERYKNYNGTEGNSAVSIN---DPNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKPG-MQVGENYITDIREVTVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLDD----GVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIGGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESLPNQ-PTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTGGSC----SISPDLVWMDDNSIDLALDLLTRMKIKAMSIDISSKRDVNGIYYP----DGKLTLGIKGNPNFGLVRNLMVGVKSRAHKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLI | |||||||||||||
4 | 6h3iA | 0.38 | 0.36 | 10.74 | 0.90 | MUSTER | PASQSLIYAFDTNPDNRKNQD-YGDDYTYYLNA-----DGGVLERYKNYNGTEGNSAVSIND---PNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKP-GMQVGENYITDIREVTVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLDD----GVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIGGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESL-PNQPTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTG----GSCSISPDLVWMDDNSIDLALDLLTRMKIKAMSIDISSKRDVNGIYY----PDGKLTLGIKGNPNFGLVRNLMVGVKSRDHKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLI | |||||||||||||
5 | 6h3jA | 0.40 | 0.35 | 10.24 | 8.09 | CNFpred | ----------------------TGDDYTYYLNAD-----GGVLERYKNYNGTEGNSAVSIN---DPNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKP-GMQVGENYITDIREVNVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRY-----------VEFDVAAVNIQENGTKCPVNYVMPPGVQ--------------EQALAVRIGGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESLPN-QPTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTGGSCSI----SPDLVWMDDNSIDLALDLLTRMKIKAMSIDISSKRDVGIYYPDND-----LTLGIKGNPNFGLVRNLMVGVKSRADHDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLI | |||||||||||||
6 | 6h3iA | 0.38 | 0.36 | 10.69 | 6.88 | HHsearch-2 | AFDNRKNQDVGLDGLPSSREGIYGDDYTYYLNA-----DGGVLERYKNYNGTEGNSAVSIN---DPNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKPG-MQVGENYITDIREVTVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLD----DGVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIGGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESLPNQ-PTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTGGSC----SISPDLVWMDDNSIDLALDLLTRMKIKAMSIDISSKRDVNGIYY----PDGKLTLGIKGNPNFGLVRNLMVGVKSRAHKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLI | |||||||||||||
7 | 6h3iA | 0.38 | 0.36 | 10.56 | 2.64 | Neff-PPAS | --LDGLPSSREGSIY--------GDDYTYYLN-----ADGGVLERYKNYNGTEGNSAV---SINDPNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKP-GMQVGENYITDIREVTVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLD----DGVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIGGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESL-PNQPTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTGGS----CSISPDLVWMDDNSIDLALDLLTRMKIKAMSIDINSSKRDVNGIYY---PDGKLTLGIKGNPNFGLVRNLMVGVKSRADKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLI | |||||||||||||
8 | 6h3iA | 0.38 | 0.36 | 10.68 | 10.70 | HHsearch | AFDNRKNQDVGLDGLPS--SREGGDDYTYYLNA-----DGGVLERYKNYNGTEGNSAVSIN---DPNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKPG-MQVGENYITDIREVTVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLD----DGVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIGGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESLPNQ-PTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTGGSC----SISPDLVWMDDNSIDLALDLLTRMKIKAMSIDISSKRDVNGIYY----PDGKLTLGIKGNPNFGLVRNLMVGVKSRAHKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQL- | |||||||||||||
9 | 4aq1A | 0.09 | 0.08 | 3.27 | 1.31 | PROSPECTOR2 | AVPEAVNSTTVKVTFNTQIADVDFTNFAIDNGLT-----------VTKATLSRDKKSVEVVVNKPFTRNQEYTITATGIKNLKGETAKELTGKFVWSVQDAVTALNNSSLKVGEESGVKDQDGKDVVGAKVELTSSNTNIVVVSSGEVSVSAAKDVTAKVTLPDGVVLTNTFKVTVTEVGFTLVDNLSNAPAEKVTSMTKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINGSELLVTANAGQSGKASFEVTFKDNTIKFGTKGKVTVTTNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTKADATPVGLDIVAPSEIDVNAPNTASTADVDFINFESVEIKVTPTATTLVGTNDGNVLQFKGNDELTLLTRIPVKYINSASVPASATVATSPVTVKLNSSDNGVIDPTQLVKDEDINEFIAVSKAAKNDGYLYVKDASGEVIPTGANVYGLNHDATNGNIWFDEVSFTLVIKSIYVKGADKDDNNLLAAPVSVNKGS | |||||||||||||
10 | 6h3iA | 0.39 | 0.35 | 10.48 | 7.16 | SAM | ------------------------DDYTYYLNA-----DGGVLERYKNYNGTEGNSAVSIND---PNRGSTTLPDVEDINRDNTMSTINAYYEYSIDVKPG-MQVGENYITDIREVTVDLPNGGTTNARWIQFKIPVSQPQNTIGNITDFRSIRFMRMFMTGFNSQMTVRFGALDLVRGEWRRYTGTLDD----GVEFDVAAVNIQENGTKCPVNYVMPPGVQREQLYNNNTVINQNEQALAVRIGGLQYQDSRAVFKNVSVDMRQYKKLKMFLHAESLPNQ-PTLEDDEMVGFIRFGNDFTQNFYQVEIPLKVTKTGGSC----SISPDLVWMDDNSIDLALDLLTRMKIKAMSIDISSKRDVNGIYYP----DGKLTLGIKGNPNFGLVRNLMVGVKSRAHKDIKGEVWFNELRLADLENKGGMAAILNVDTNMADFATVSATGRKSTIGFGSLEQGANERDREDVQQYNIVTNLNLGKLLPKKWGINLPFNYAIGEEVITPEYDPFNQDIKLDQLI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |