Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | FWPEQGWRHAQGMLDFELNQLSTHFTRSAVVQEPGRTAHWLVERSYEWIFVKSGLLDWMSNAAAQARAPSHGGTKDFRYYVSQVYVWSESYLIAAAYTTLTFIVRLLVLVLTLPLFLMAAFVGFVDGLARRDVRKFGAGRESGFVYHRAKASVMPLIVLPWVVYLALPISVHPLLILLPSAILLGVAVCITASTFK |
1 | 6d4hA1 | 0.09 | 0.09 | 3.34 | 0.84 | SPARKS-K | | SHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLTTTLDDILKSFIRVASGYLLMLAYACLTMLRWDCSKSQGAV-GLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLI |
2 | 6cc4A2 | 0.12 | 0.11 | 3.77 | 1.12 | FFAS-3D | | ------------MFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLIFAEGAFSQAFVPILAEY--KSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAVIMVTLTSQLLKITFPYILLISLASLVGAILNTWN-------RFSIPAFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGVLQLVY---- |
3 | 2vv5A | 0.12 | 0.06 | 1.97 | 0.35 | HHpred | | -----------------------------------------------------------------------------------------------------YAVN--IVAALAIIIVGLIIARMISNAVNRLMISRKID---ATVADFLSALVRYGIIAFTLALGRVGVQTASVIAVLGAALVVGLALQGSLSNLA |
4 | 3vvnA2 | 0.08 | 0.08 | 3.20 | 0.75 | MUSTER | | ILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGGENGVAVFTSAWRITMLGIVPILGMAAATTSGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTIKGDLISALRVFLVLTPFGMMTSAM-IGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRMR |
5 | 3rkoC | 0.11 | 0.10 | 3.65 | 1.00 | CNFpred | | --TQASGLVMLIAILALVFVHYNATGVWTFNYEE-GVEYLLMLGFFIAFAVKMPVHGWLPDAHSQA-----------PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT-------DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY |
6 | 2vv5A | 0.13 | 0.06 | 2.12 | 0.66 | HHsearch-2 | | ---------------------------------------------------------------------------------------------------LSYAVNI--VAALAIIIVGLIIARMISNAVNRLMISRKID---ATVADFLSALVRYGIIAFTAALGRVGVQTASVIAVLGAALVVGLALQGSLSNLA |
7 | 5cwqA | 0.09 | 0.09 | 3.46 | 0.84 | Neff-PPAS | | ---ERESEEAERRLQEARKRSEEARERDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEE |
8 | 2vv5A | 0.13 | 0.06 | 2.12 | 0.66 | HHsearch | | ---------------------------------------------------------------------------------------------------LSYAVN--IVAALAIIIVGLIIARMISNAVNRLMISRKID---ATVADFLSALVRYGIIAFTLILGRVGVQTASVIAVLGAALVVGLALQGSLSNL- |
9 | 1rh1A | 0.06 | 0.06 | 2.52 | 0.80 | SP3 | | ILDSNSLSQRQEAENNAKDDFRVKKEQENDEKTVLTKTSEVIISVGDKVGEYLGLSREIAENINNFQGKTIRSYDDAMSSINKLMANPSLKINATDKEAIVNAWKAFNAEDMGNTFKAADYAIKANNIREKSIEGYQTGNWGPLMLEVESWVISSAVALSLFSLTLGSALIAFGLSATVVGFVGVVIAGAIGAFID |
10 | 5cwpA | 0.10 | 0.10 | 3.74 | 0.84 | PROSPECTOR2 | | --MSSDEEEARELIERAKEAAERAQEAAERTGDPARELKRLAQEAAEEVKRDPSIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVVNEALKLIVEAIEAAVRALEAAVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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