>PF14335 (252 residues) LQLPDSARVDQRVPKKLLLENGAPTASDKRLITDAIEEIQWLAALKPNTIGVPSYRDAQR EYLEIAVLGVTLRGAVKPASLARLAELVHRAVPYPVLLLMEGPALTLSLAHKRWAQNEAG KVVLDGDPASASLSHITEDVVQDAEAVDRSIAPQIERAFVQSLSIARQPQTTLHALYQGW MERVCALQAARLTGTYQADTTPEQAAARWQALADCARLENEIDRLRAQAAKEKQLARQVE LNLTLKRVQAEL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | LQLPDSARVDQRVPKKLLLENGAPTASDKRLITDAIEEIQWLAALKPNTIGVPSYRDAQREYLEIAVLGVTLRGAVKPASLARLAELVHRAVPYPVLLLMEGPALTLSLAHKRWAQNEAGKVVLDGDPASASLSHITEDVVQDAEAVDRSIAPQIERAFVQSLSIARQPQTTLHALYQGWMERVCALQAARLTGTYQADTTPEQAAARWQALADCARLENEIDRLRAQAAKEKQLARQVELNLTLKRVQAEL | |||||||||||||||||||
1 | 5cqcA1 | 0.12 | 0.10 | 3.52 | 0.80 | SPARKS-K | YPPETSWEVNK----------GMNSSRLHKLYSLFFDK---SSAFYTGAYGFQSKKND----QQIFLFVAGYHVDAKSDKLDRRLSEISEFCSQPATFILPFVQHQVLLTISYDPKS---KQLTPTVYDSIGRDTYSESLSSYFKGKYRTTCDEILTQSIEKAILGKFTRANCGSYTFRTIKEVISSSAQGTTSN---SYLTSQHVQDIESCIKYRNL--GVVDIESALTEGKTLP---------------- | |||||||||||||
2 | 3hhmB2 | 0.09 | 0.04 | 1.36 | 0.82 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------------------------------YEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQEYIEKFKREGNEKEIQRIMHNYDKLKRISEIIDSRRRLEEDLKKQAAEYREIDIKPDLIQLRKT- | |||||||||||||
3 | 6r8fB | 0.15 | 0.10 | 3.48 | 0.32 | HHpred | -----VIEIHNHQPSKLFY-ASKVNEELDRILKDRRKKVIGWYRFRRNTQQQMS-----------------YREQ---VLHKQLTRILG---VPDLVFLLFSANSALEYVLFRPNR---R------YNQ--RISLAIP-NLGNTSQKVSSVPSQSYAKVIKEHGFDVMDIRAIYQVYNALQEKVQAVC-----------------ADVEKSERVVESCQAEVNKLRRQITQRK------------------- | |||||||||||||
4 | 5cwpA | 0.13 | 0.12 | 4.10 | 0.77 | MUSTER | ---------------------MSSDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEVKRDPSSSDVNEALKLIVEA--------IEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDP | |||||||||||||
5 | 5iwiA | 0.14 | 0.10 | 3.40 | 0.60 | CNFpred | PDFPTAGLILG-------------KSGIRRAYETGRGSIQMRSRAVIEERG---------GRQRIVVTEIPFQ-----VNKARMIEKIAELVKIDGITDLRD-GVRVVIDVRKDA-----------------------------------NASVILNNLYKQTPLQRPKLINLKEALVHYLEHQKTVVRRRTQY------NLRKAKDRAHILEGLRIALDHIDEIISTIRESDDKVAMESLQQRFKLSEKQA | |||||||||||||
6 | 6f1tX2 | 0.17 | 0.05 | 1.70 | 0.46 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATL-----------------EENDLLQGTVEELQDRVLILERQGHKDLQLLELQEVRLSYRQLQGGG | |||||||||||||
7 | 5cwpA | 0.13 | 0.12 | 3.99 | 0.90 | Neff-PPAS | ----------------------SSDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERT--------GDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDP | |||||||||||||
8 | 6od2A | 0.26 | 0.05 | 1.47 | 0.61 | HHsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDDDI----YESAELKRVEEEIEELKRKILRKKHDLRKLSLNNQLQELQSD- | |||||||||||||
9 | 3u44A | 0.11 | 0.09 | 3.16 | 0.60 | SP3 | IDLDP----GFRI----------ADQTEGELIGDEVDEL------------FEDEYAKGEK--AFFELVDRYTTDRHDLDLQFLVKQVYEY----------------------SRSHPNPEAWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRALELTDNFLDDLAQIDELIQHQDFSELYKRVPAVSDPALLDEATDLRNGAKKLLEKLKTDYFTRSPEQHLKSLAEMKPVIETLVQLV | |||||||||||||
10 | 6defA | 0.09 | 0.09 | 3.30 | 0.84 | PROSPECTOR2 | TFLPRGQGIVTRRPVLQLINRQSSDERLADSTDKAANLDEWGEFLHLPGQKFGRNAGISPAPINLRIYSPHVVGDQPRDIERQIRDMILKYIQKPIILAVTAAN-------VDLANSDDEGTDVVDILAGRIIPLRLGVNRGQRDIDNKKPITAALEAEKAFFENHKAYRNKSAYCGTPYLARKLNLILMMHI--------KQTLPDIKQRISSLQKYQQELEALDYTVRRRKECQQMVESLQRAAEIVSQV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |