Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TGTVNMYISDQQNAIDQFDHLTVTVTSVAAHRVDDPDTEANESGWVEQEIDNVTVDLTELQGENASKLGAIEAPNGTYNKVFVHVDSDINATLADGSSQTVKLPSNKLRLNTEFTVGNGEEIDFVFDMTVFERGNGDYILKP |
1 | 4uypA | 0.12 | 0.10 | 3.51 | 0.83 | SPARKS-K | | VVSVPITFTNVPK--SGIYALSFRTNKVTVASIDAGSIENASDFTTYYNNENGFASMFEAPVDRARIID----SDGVFATINFKVSDSAK----VGELYNITTNSAYTSFYYSDEIKNVVYNDGKIEVIAL----------- |
2 | 5yu5A3 | 0.11 | 0.09 | 3.28 | 0.66 | FFAS-3D | | TGGIRFFKHEAGSS-KSLANATFILQRYAVLEGVNGMAGTYQPTKITWTTNQDAATRLKTSGAETANLTIQGLLPGRYTLVE------------------TAAPEG-YEILDPFEVIAGTWGTKTIRIANTPVNQ------- |
3 | 4ecnA | 0.18 | 0.15 | 4.81 | 0.30 | HHpred | | YGYVQFKLYKSTS---S------SAQKIKVVTHNG--------TT-----VSQTLLLNAYNANNAEYLDKLQLLAGTYKIVGYYLYDGLDEVLLAGDDNELTVVSGGLLE-KALTVDAVPHGTVTF--KLSKEGIGEYLFS- |
4 | 5n8pA | 0.14 | 0.14 | 4.77 | 0.70 | MUSTER | | GAAITLNTS---SGVTGLTALNTNTSAQTVTAGAGQNAAQAANNVAVDGGANVTVASTG-VTSGTTTVGANSAASGTVSVSVANSSTTGAIAVTGGTAVTVAQTVNTTLTQADVTVTNSSTTAVTVTQTAAATAGATVAGRV |
5 | 3jx8A | 0.14 | 0.12 | 4.11 | 1.09 | CNFpred | | PTVYKIKSNSK-----ELKELNTVVNRMEINMAG--------SGNVELRG-PVKGYKLECNM---AGSGNIIAKDIQLDNLSCSLASSGEIEVIGVDRASFNVAGGEIKAF-KAECNISGEISVYAILDANIVGSGEIHYKG |
6 | 4ecnA | 0.16 | 0.13 | 4.44 | 0.45 | HHsearch-2 | | YGYVQFKLYKSTS---S------SAQKIKVVTHNG--------TT-----VSQTLLLNAYNANNAEYLDKLQLLAGTYKIVGYYLYDGLDEVLLAGDDNELTVVSGGLLE-KALTVDAVPHGTVT--FKLSKEGISEYLFSN |
7 | 1guiA | 0.10 | 0.09 | 3.39 | 0.82 | Neff-PPAS | | DEWFIWQAGDYGISGARVSDYGVRDGYAYITIADPGTDTWHIQFNQWIGLYR---------GKTYTISFKAKADTPRPINVKILQNHDPW---TNYFAQTVNLTADWQTFTFTYTHPDDADEVVQISFELGEGTATTIYFDD |
8 | 4ecnA | 0.18 | 0.15 | 4.81 | 0.56 | HHsearch | | YGYVQFKLYKSTS--S-------SAQKIKVV-THN-------GTT-----VSQTLLLNAYNANNAEYLDKLQLLAGTYKIVGYYLYDGLDEVLLAGDDNELTVVSGGLLE-KALTVDAVPHGTVTF--KLSKEGIGEYLFS- |
9 | 3wkoA | 0.13 | 0.13 | 4.37 | 0.74 | SP3 | | HGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALK-PGDPNTNGDTFTLKELLAKVGEKIRLYINNVGPNSFHVVGTVFDDVYLPNNHLQGMQTVMLPASGGAVVEFTVT----RPGTYPI-- |
10 | 5ny0A2 | 0.08 | 0.08 | 3.07 | 0.64 | PROSPECTOR2 | | VSKIDIWMIADIGIHPHTTALTITMENIKLDGDTSNSFTVGEGSTVKLSAKVDNVRILPYEDSNTANV---SFAKGSDVTLHLRMGASISNQIDFNGKATFIKDSEFDYYWNDQQKTGSTGVANFSNVLFQAGPGASNVNTY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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