Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RPFKYMACYDLLSKAPKWHDYNAAMTKKCEQKKKPSPNPSSPLPASLPSSTSADTVHLTSDASGDETARGEPTRPIGRKKAKVAYQEEKLDASNHEHLKKMATAHIDIAEVAKKQHTALASAMSAQHSALKRLADEAIMNKDLTGADDDVKKYYILQRKRI |
1 | 3ieeA1 | 0.09 | 0.07 | 2.85 | 1.04 | SPARKS-K | | VIKYYNTSLGVLKDVK--EKDVNAVLDYEQKGKTPALSAVPPAVVSKDSAIVLNPGNCFNE--------------------ETRRNLKQNYTGLFQARTEFYANFDTYLSYLKKDVTNAKKLLDVNYQLSTQSEYKQNIFDILSPFTEQAELVLLVD---- |
2 | 2otoB | 0.15 | 0.12 | 4.19 | 1.11 | MUSTER | | -------------AANNPAIQNIRLRHENKDLKARLEN------AEVAGRDFKRAEELEKAKQALEDQRK-------DLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLE |
3 | 6eunA | 0.08 | 0.07 | 2.93 | 1.05 | Neff-PPAS | | -------------DDVKKAATVAIAAAYNNGQEINGFKAGETIYDIDEDGTITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQNVDAKVKAAESEIEKLTTKLADTDAALADTDAALDATTNALNKLGENITTFAEETKTNIVKIDEKLEAASKH- |
4 | 5mqfH | 0.08 | 0.06 | 2.50 | 1.01 | SPARKS-K | | CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQP-------LSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ--------------------- |
5 | 4mt8A | 0.09 | 0.04 | 1.68 | 0.82 | FFAS-3D | | ------------------------------------------------------------------------------SHAAILEESMHARDQLMEQNFALDKARQEAEMAVHARNDFLAVMNHEMRTPMHAIISLSSLLLE-TELSPEQRVMIETILKS- |
6 | 6gmhQ | 0.07 | 0.07 | 2.81 | 0.31 | HHpred | | -WLNLAHIYVEQKQYISAVQMYENCLRKFYKHCGKL-QECKQARHVAPSDT-VLMFNVALVLQRLTSVLKDEKSNLKVLNAVKELELRYFSYLTARCSDLLSQAQYHVARARAKQEQEKELLRQKLLKEQEEKRLR-EKE-EQKKLLEQRAQYVEKTKNIL |
7 | 6eunA | 0.08 | 0.07 | 2.74 | 1.11 | MUSTER | | -------------DDVKKAATVAIAAAYNNGQEINGFKAGETIYDIDEDGTITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQNVDAKVKAAESEIEKLTTKLADTDAALADTDAALDATTNALNKLGENITTFAEET----KTNIVKIDEKLEAA |
8 | 5xg2A | 0.08 | 0.07 | 2.92 | 0.49 | CNFpred | | -------FDTVVKELEEARKSLYEGEARIKRAEEEKERLKALTGEARLPGLRERAENLRRLVEEKRAEISELERRLS--------QSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLK |
9 | 6f1tX2 | 0.03 | 0.01 | 0.81 | 0.44 | HHsearch-2 | | -----------------------------------------------------------------------------QHIIRLESLQAEI----KMLSDRKRELEHRLSATLEENDLLQDRVLILERQGHDKDLQLHQSQLE---LQ-EVRLSYRQLQGGG |
10 | 6ewyA | 0.10 | 0.09 | 3.46 | 1.03 | Neff-PPAS | | -RDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSVSY--------LSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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