>PF14269 (303 residues) QAAKLHGEDVLFSFEGDHNPSYGHGHGHVTLLNNNYETIRELRAGNRKLSDKHEFQILNE KTAVIQIHQPIPYDLGPFGGTKKQQWIVNSIFQELDIETGEVLFEWSSLDHVSPHETVFS VEDGSVGSGHNSSDAWNYFHINSIDKDSDGNYLLSARICASIYKINGKTGEVIWKLGGLP GITSSTITSVGNFTFSFQHHARYLETSEDKSRQLISLFDNSAHGSENKDGKVKLNGISSA KIIEINTKTWEATLLYNAEAPYNFSVKSQGSAQVLPNKNVLVNWGSLGAVTEYNANEEIV FHA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QAAKLHGEDVLFSFEGDHNPSYGHGHGHVTLLNNNYETIRELRAGNRKLSDKHEFQILNEKTAVIQIHQPIPYDLGPFGGTKKQQWIVNSIFQELDIETGEVLFEWSSLDHVSPHETVFSVEDGSVGSGHNSSDAWNYFHINSIDKDSDGNYLLSARICASIYKINGKTGEVIWKLGGLPGITSSTITSVGNFTFSFQHHARYLETSEDKSRQLISLFDNSAHGSENKDGKVKLNGISSAKIIEINTKTWEATLLYNAEAPYNFSVKSQGSAQVLPNKNVLVNWGSLGAVTEYNANEEIVFHA | |||||||||||||||||||
1 | 3elqB2 | 0.15 | 0.15 | 4.86 | 1.96 | SPARKS-K | RDRDINKRGYLMGIRETPRGTFTAVGQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKS---NYRRDDGV--HVTTIRDHILEVDKS-GRVVDVWDLTKILDPKQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDKDDSIILSSRHQG-VVKIGR-DKQVKWILAPSKGWEKPLCENSDFDFTYTQHTAWISSKG------TLTIFDNGDGREQPALPT---MKYSRFVEYKIDEKKGTVQQVWEYGKERGYYSPITSIIEYQADRNTMFGFGGVGKLNEIDYTKEVKVEI | |||||||||||||
2 | 3elqB | 0.13 | 0.13 | 4.43 | 2.48 | FFAS-3D | RDRDINKRGYLMGIRETPRGTFTAQGQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKSNYRR-----DDGVHVTTIRDHILEVD-KSGRVVDVWDLTKILDPKRDALLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQGVVKIG-RDKQVKWILAPSKGWEKGLCENSDFDFTYTQHTAWISSKGT------LTIFDNGDGRH-LEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERDFYSPITSIIEYQADRNTMFGFGGSIKLNEIDKTKEVKVEI | |||||||||||||
3 | 3elqB | 0.17 | 0.16 | 5.31 | 3.92 | HHpred | RDRDINKRGYLMGIRETPRGTFTAVQQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKS---NYRRDDGV-HVTTIR-DHILEVDK-SGRVVDVWDLTKILDPKRDLGALDAGAVHAGQGVGPGRNWAHVNSIAYDADDSIILSSRHQG-VVKIGR-DKQVKWILAPSKGWE-KPLALKSDFDFTYQHTAWISSKG------TLTIFDNGDGRHLEQ-PALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERDFYSPITSIIEYQADRNTMFGFGGVGKLNEIDYTKEVKVEI | |||||||||||||
4 | 3elqB2 | 0.17 | 0.16 | 5.23 | 1.52 | MUSTER | RDRDINKRGYLMGIRETPRGTFTAVQGHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKS---NYRRDDGV--HVTTIRDHILEVDK-SGRVVDVWDLTKILDPKRDALLEPDTPFGDALGVGPGRNWAHVNSIAYDADDSIILSSRHQ-GVVKIGR-DKQVKWILAPSKGWNENGLCENSDFDFTYQHTAWISSKGT------LTIFDNGDGRHLE-QPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGFYSPITSIIEYQADRNTMFGFGGVGKLNEIDYTKEVKVEI | |||||||||||||
5 | 3elqA | 0.16 | 0.15 | 4.92 | 3.27 | CNFpred | GIRETP-RGTFTAVQG----------QHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKS---NYRRDDGV--HVTTIRDHILEVDK-SGRVVDVWDLTKILDPKRLLGALDDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQGVVKIGR-DKQVKWILAPSKGWEK-LLKPV-DFDFTTQHTAWISS------KGTLTIFDNGDGRHL-EQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKGYDFYSPITSIIEYQADRNTMFGFGGVGKLNEIDYKKEVKVEI | |||||||||||||
6 | 3elqB | 0.17 | 0.16 | 5.31 | 1.81 | HHsearch-2 | RDRDINKRGYLMGIRETPRGTFTAVQQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKS---NYRRDDGV-HVTTIR-DHILEVDK-SGRVVDVWDLTKILDPKRDLGALDAGAVHAGQGVGPGRNWAHVNSIAYDADDSIILSSRHQG-VVKIGR-DKQVKWILAPSKGWE-KPLALKSDFDFTYQHTAWISSKG------TLTIFDNGDGRHLEQ-PALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERDFYSPITSIIEYQADRNTMFGFGGVGKLNEIDYTKEVKVEI | |||||||||||||
7 | 3elqB2 | 0.16 | 0.15 | 4.96 | 2.26 | Neff-PPAS | RDRDINKRGYLMGIRETPRGTFTAVQGHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKSNYRRDDGVHV-----TTIRDHILEVDK-SGRVVDVWDLTKILDPKRDALLGPDTPFGDALGVGPGRNWAHVNSIAYDADDSIILSSRHQ-GVVKIGR-DKQVKWILAPSKGWENGLCENSDFDFTYTQHTAWISSKG------TLTIFDNGDGRH-LEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERDFYSPITSIIEYQADRNTMFGFGGVGKLNEIDYTKEVKVEI | |||||||||||||
8 | 3elqB | 0.17 | 0.16 | 5.31 | 2.93 | HHsearch | RDRDINKRGYLMGIRETPRGTFTAVGQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKS---NYRRDDGV-HVTTI-RDHILEVDK-SGRVVDVWDLTKILDPKRDLGALDAGAVHAGQGVGPGRNWAHVNSIAYDADDSIILSSRHQG-VVKIGR-DKQVKWILAPSKGWEK-PLALKSDFDFTYQHTAWISSKG------TLTIFDNGDGRHLE-QPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERDFYSPITSIIEYQADRNTMFGFGGVGKLNEIDYTKEVKVE- | |||||||||||||
9 | 3elqA2 | 0.15 | 0.15 | 4.87 | 1.80 | PROSPECTOR2 | RDRDINKRGYLMGIRETPRGTFTAVGQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKS---NYRRDDGVHVTTI--RDHILEVDK-SGRVVDVWDLTKILDPKRDALLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDIILSSRHQG-VVKIGR-DKQVKWILAPSKGWENGLCENSDFDFTYTQHTAWISSKGT------LTIFDNGDGRHLEQPAL-PTMKYSRFVEYKIDEKKGTVQQVWEYGKERGFYSPITSIIEYQADRNTMFGFGTVGKLNEIDYTKEVKVEI | |||||||||||||
10 | 3elqB | 0.17 | 0.16 | 5.19 | 3.26 | SAM | -DRDINKRGYLMGIRETPRGTFTAVQGHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGK---SNYRRDDGV-HVTTIR-DHILEVDK-SGRVVDVWDLTKILDPKRDLGAL-A-----GQQVGPGRNWAHVNSIAYDADDSIILSSRHQG-VVKIGR-DKQVKWILAPSKGWE-KPLALNSDFDFTYQHTAWISSKG------TLTIFDNGDGRHL-----LPTMKYSRFVEYKIDEKKGTVQQVWEYGKERDFYSPITSIIEYQADRNTMFGFGGVGKLNEIDYTKEVKVEI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |