Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | EAYRPLAEALIESGVFETVITALNNQLLLPRNIDVVFQECGTINAFYDPESVSIAVCYELVEWLVQNFSQIEEDPQVAFGRGLDSTVFILNHEVGHALINVLQLPTTGREEDAVDELASILVMESFPGGETTVLNAAQSFFLSGAQVTDLSELDFADEHSLDQQRFFGISCLVFGRNPDGNPQLLELGILSEDRASLCVQEYQDKLDAWSVLL |
1 | 5cwmA | 0.11 | 0.10 | 3.71 | 0.90 | SPARKS-K | | KLVKEAEELLRQAKDLEKALRTAEEAAREAKKVLEQAEKEG------DPELRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKERALRVAEEAARLAKRVLELAEKQGDP-----------EVARRAVELVKRVAELLERIARESGSAKERAERVREEARELQERVKELR |
2 | 6aitA1 | 0.12 | 0.10 | 3.45 | 0.99 | FFAS-3D | | ---DYYVRQLRGSQYINSLGMRLVSHANSVKPFHFFLINNDEINAFAFFG-GNVVLHSALFRYSDNE----------------SQLASVMAHEISHVTARAMEISFTQQNEQEADRIGIQVLQRSGFDPQAM---PTFLEKLLDQARYSSRPPEILLTHPLPESRLADA----------------------RNRANQMSEDFYLAKARTLGMY |
3 | 6aitA1 | 0.11 | 0.09 | 3.23 | 0.67 | HHpred | | --GDYYVRQLRGTQYINSLGMRLVSHASVKTPFHFFLINNDEINAFAFF-GGNVVLHSALFRYSD----------------NESQLASVMAHEISHVTQRHGMISFTQQNEQEADRIGIQVLQRSGFD-PQAMPTFLEKLLDQAR--YSSRPPEILLTHPLPESRLADARNRANQMRPMV--------VQSSE-------DFYLAKARTLGM- |
4 | 5cwmA | 0.10 | 0.10 | 3.62 | 0.87 | MUSTER | | KLVKEAEELLRQAKDLEKALRTAEEAAREAKKVLEQAEKEGDPEVA----LRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRV---AELLERIARESGS-KERAERVREEARELQERVKELR |
5 | 3c37A | 0.14 | 0.12 | 4.00 | 0.76 | CNFpred | | ELGNKFAVEIEK-RYVDKVGKRLLSGARAEFDYVFKVVKDDSVNAFAIP--GRVYVHTGLLKAAD------------NETELAGVLAHEINHAVARHGTRQMT------QEYGYSLVLSLVLGD------NMLAQLAGQLFGK------AGMMSYSREYENQADFLGVETMYKAGYNPNGLTSFFQKL-LTSERIQRVQAEIAK-ETEFKKIK |
6 | 6aitA1 | 0.11 | 0.09 | 3.24 | 0.81 | HHsearch-2 | | QMGDYYVRQLRGTQYINSLGMRLVSHASVKTPFHFFLINNDEINAFAFF-GGNVVLHSALFRYSD----------------NESQLASVMAHEISHVTQRHGMISFTQQNEQEADRIGIQVLQRSGFD-PQAMPTFLEKLLDQAR--YSSRPPEILLTHPLPESRLADARNRANQMRPMV--------VQS-------SEDFYLAKARTLGMY |
7 | 5cwmA | 0.12 | 0.12 | 4.15 | 0.94 | Neff-PPAS | | KEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGD-PEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGD---PEVARRAVELVKRVAELLERIARESGSAKERAERVREEARELQERVKELR |
8 | 6aitA1 | 0.11 | 0.09 | 3.24 | 1.02 | HHsearch | | QMGDYYVRQLRGTQYINSLGMRLVSHASVKTPFHFFLINNDEINAFAFF-GGNVVLHSALFRYSD----------------NESQLASVMAHEISHVTQRHGMISFTQQNEQEADRIGIQVLQRSGFDP-QAMPTFLEKLLDQARY--SSRPPEILLTHPLPESRLADARNRANQMRPM--------VVQSS-------EDFYLAKARTLGM- |
9 | 6aitA1 | 0.10 | 0.09 | 3.32 | 0.89 | SP3 | | EMQDYYVRQLRGSAYINSLGMRLVSHANVKTPFHFFLINNDEINAFAFF-GGNVVLHSALFRYSDNESQLATQRHLARAMEDQQTWVGALGSILLAMASPQGMISFTQQNEQEADRIGIQVLQRSGFD-PQAMPTFLEKLLDQARYSSRP--PEILLTHPLPESRLADARNRANQMRPMVVQS---------------SEDFYLAKARTLGMY |
10 | 5cwmA | 0.11 | 0.11 | 3.88 | 0.71 | PROSPECTOR2 | | DELKRVEKLVKEEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVA----LRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVA----ELLERIARESGSEEERAERVREEARELQERVKELR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|