Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | AASACSCSVGSSSSHGVPKGDVASQISAKMTDPAGLKPESVSCPNDLPAKVGAQLDCTMKSNGKNYDVNVTVTSVNG |
1 | 4r80A | 0.15 | 0.12 | 3.94 | 1.19 | SPARKS-K | | ------------PSEEEEKRRAKQVAKEKILEQNPVQVRRVQKQGNT-----IRVELEITENGKKTNITVEVEKQGN |
2 | 5boiA1 | 0.12 | 0.09 | 3.23 | 0.49 | FFAS-3D | | --------------REVSEDVAKQVARSFLNLKGNEQIHIVKSGKDADYE---VYSLTITDPKTNQETYMDITQKGG |
3 | 5g2fA | 0.16 | 0.12 | 3.91 | 0.31 | HHpred | | ------------------VRNVALALEAQRDPSTGALPTLTDCLSGFGQRPKTVTACTITYLNAL-DYVIEASLDGA |
4 | 1tu1A | 0.14 | 0.14 | 4.84 | 0.80 | MUSTER | | PAREASFVISRDASQGAPFADYVARQLENAEKQLGFKLHKRW-DINIHGHAAVLLDYQWQREGRDLMLRQVFIERRP |
5 | 4rehA | 0.07 | 0.05 | 2.17 | 0.87 | CNFpred | | ------------------GDVFHELFGTRVPNITPANIQGCDLHEGEFGKVGSVVIWNYSIDGNAMIAKEEIVAIDE |
6 | 6cctA | 0.33 | 0.12 | 3.51 | 0.39 | HHsearch-2 | | --------------------------------------------------SGSKFRGHQKSKGNSYDVEVVLQHVDT |
7 | 3k7cA | 0.09 | 0.09 | 3.45 | 0.93 | Neff-PPAS | | VSYIDLSEAKSDEEKTFVSDKITQVVAENAAKAKRGGVKDIQIEEKTINKDSAKIRVLVLFNDNNQSSNVFLAKKDR |
8 | 5g2fA | 0.15 | 0.12 | 3.95 | 0.66 | HHsearch | | ------------ANLAAGQRNVALALEAQRDPSTGALPTLTDCLSGFGQRPKTVTACTITYAL-DYVIEA--SLDG- |
9 | 5boiA1 | 0.11 | 0.09 | 3.25 | 0.99 | SP3 | | -------------GREVSEDVAKQVARSFLNLKGNEQIHIVK--SGKDADY-EVYSLTITDPKTNQETYMDITQKGG |
10 | 2kxxA | 0.11 | 0.10 | 3.79 | 0.42 | PROSPECTOR2 | | -GSHMSTLERVVYRPDLTANDVSKQVAYALLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTSSGVLTNIDNKPALSGN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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