>PF14199 (369 residues) MNKKEVLEIRKQFSPENCTITRICGCYVDHEKQKILELKKAFLSMPEEEAFKYFDIFKKT LSGTIGKNLINMEFPLDQEKPGGTQDFLLKLRESRLEDEMLVEEFYDKVIENYIYAENYY IILIHAAYDIPGKASDNMEMFDASDEVYEHIMCSICPVNLSKAGLSYNAATNSIEDRIRD WIVDAPAKGFLFPAFQDRSADIHNILYYSKKPEELQPDFIGNVLGSRIPLTAKDQQETFH AIISDTLGEECDYDVVRSIHDNLTELIEEHKEAPEPLVLSRPDVKRLLEKSGVPDERMES FDKEYEEIVGEKHSLLASNIVNTKTFQIETPDVIVKVNPERSDLVETKLIDGRKCLVIAI DDHLEVNGI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MNKKEVLEIRKQFSPENCTITRICGCYVDHEKQKILELKKAFLSMPEEEAFKYFDIFKKTLSGTIGKNLINMEFPLDQEKPGGTQDFLLKLRESRLEDEMLVEEFYDKVIENYIYAENYYIILIHAAYDIPGKASDNMEMFDASDEVYEHIMCSICPVNLSKAGLSYNAATNSIEDRIRDWIVDAPAKGFLFPAFQDRSADIHNILYYSKKPEELQPDFIGNVLGSRIPLTAKDQQETFHAIISDTLGEECDYDVVRSIHDNLTELIEEHKEAPEPLVLSRPDVKRLLEKSGVPDERMESFDKEYEEIVGEKHSLLASNIVNTKTFQIETPDVIVKVNPERSDLVETKLIDGRKCLVIAIDDHLEVNGI | |||||||||||||||||||
1 | 6gkwA | 0.11 | 0.09 | 3.26 | 0.67 | SPARKS-K | LPSINISFKELATTVKERSARGIIAVLKDAKALGLNEIHEKEDDLSA----ENKEYINLALGNVNTNKLLVYVIEGEAD----IQTALDFLETKEFNVEADKTAIKNWIIKLRDIDKVKVKAVLGINFTTEDVLVGEKKYS--VDEFTSRVAGLIAGTPLSQSVTYTKLSDVVDIPKTKVDAESKVNKGELI-LIKEAIRIARGVNSLTELTAEKGE--FQKI-------KIVDTLDIIHSDIRKVIIDTNSYDNKCLLIVAIKSYLEELEKSASTVEIDFEAQKSYLKSKGVDLSYTL---QEIKEANTGSKVF-----------------LKAKIKVLDAEDIDLSIEI------------------ | |||||||||||||
2 | 4af1A | 0.13 | 0.10 | 3.40 | 0.72 | FFAS-3D | SEDRRKYEFREELKDYEGSGTQLVTIYIPPDKQ-------------ISDVVAHVTQEHSEA---------------SNIKSKQTRTNVQDA----------LTSIKDRLRYDTFPPDNGMVVFSGAV----------DSGGGRTDMVTEVL---ESPPQPIESFRYHCDSAFLTEP--------------LAEMLGDKGLDRRESNVGWLKGKRVQPVKSAESLGQSAQRFARLRLEAIDNFYQ-------------EVAGMADDLFVPKRHEIDGILVPSPTKDEFLDGSYTDESGLSDLVDAGQAALAEADLMDDKSDMEEFFEELNGGKLATY----GFEQTRRNLIMGSDRLLVSEDLRED---- | |||||||||||||
3 | 4bm5A | 0.16 | 0.07 | 2.34 | 0.32 | HHpred | -----------------------------------------------------------------------------------------NL-RGVLN---ILQEMYRQYLIQSF----------------AAKSRT--------------------------------EKERLFNNLALGNILGVN--------------AIHSNI-----GSVIYKTYASQALT-NNRLEE--KDIEFLRNIQNMLS--MDEATCRTLLQETKEARAGFLFDKI---FMAEAVAEFRRELDVEDRRVRAFRAEIEHAIE-NSLLK--ESQE--E---------LGISAEKARQV------------------------ | |||||||||||||
4 | 5w1hA | 0.12 | 0.11 | 4.02 | 0.61 | MUSTER | NNYIAENDFGQRIKNPDYTLAQICQLIMTECMQKKSAYKMLLLVNLRKAFLEFIKENYAFVLKPYKHDLCDKAVPDFAKYVKPYAGLISRVAGSSFLSPAQANHMLGFLHSYKQYVWDIYRRASETGTEINHSIAEDKIAGVDITDVDAVIDLSLCGT-ISSEISDYFKDDEVYAEYISSYLFEYDGGNYSLNRFCNSDAVNDQKLYYDGEHPKLNRNIILSKLYGE------------RRFLEKIT-DRVSRSDIVEYYKLKKETSQYQTKGIF---DSEDEQKNIKKFQ-VEFRDLMDYSEIADELQGQ-ACLNNDSNKQATYVTLDYQGKNRKINGAILYQICAMYINGLPLYYVDKDSSWTVSDG | |||||||||||||
5 | 1f5zA | 0.14 | 0.09 | 3.24 | 0.71 | CNFpred | INEKGLRQIIRHNID--MKVDGLYVGGSTGE----------NFMLSTEEKKEIFRIAKDEAKD---QIALIAQVGSV--------------------NLKEAVELGKYATEL----GYDCLSAVTPFYYKFS-----------FPEIKHYYDTIIAET---SNMIVYSIPGVNMGIEQFGELYKPKVLGVKFTAGFYLLERLPNHLIWAGFDE-MMLPAASLGVDGAIGSTFNVNGVRARQIFELTKA--GKLKEALEIQHVTNDLIEGILAN-----GLYLTIKELLKLEGVDAG-TAEQVAKAKDLKAKFLS------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.12 | 0.12 | 4.08 | 0.40 | HHsearch-2 | MDAYS-------TRPLTLSHGSLEHVLLVAFNKILPEPTEGFAADDETPAELVGKFLGYVSPSKVGDQVLNLCLTNCYLEGNDIHALAAKLLDTTLVKKELIKNYIARIMAKRPFDKKSNSALFRA---VGEGNAQLVAIFGNTDDYFEELRDLYQTYHLVGDLIKFSAEEKVFTQGLLEWLENTPDKDYLLSI-PISCPLVIQLAHYVVKLLGFTPGELRSYLKGATGHSQG-----LVTAVAIAETDSESFFVRKAITVIGVRCYEAYPNTSLPPSILEDSLEPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL-------VVSGPPQNLTLRKAKAPSGLDQSRIPFSERLKFSNR | |||||||||||||
7 | 1qs1A | 0.13 | 0.12 | 4.15 | 0.74 | Neff-PPAS | -DKEKAKEWGKEKEKEWATEKGKMNNFLDNKNDIKTNYKEITFSMSFEDEIKDLKEIDKMFDTNLSNSIITYKNV-----EPTTIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTA---------------QQVSSKERVILKVTVPSTPTKAGVILNNSEYKMLIDHVDKVSKVVKKGVECLQIEGTLKKS---LDFKNDINAEAHSWGMKNYEEWAKDLTDSQREALDGYARQDYKEGSGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQGGFASEKEILLDKDSKYHIDKVTE-VIIKGV | |||||||||||||
8 | 2w1tA | 0.12 | 0.05 | 1.91 | 0.46 | HHsearch | VRRDDPKEIRRTLRIREGDPLEI---FVDRDGDVILKKYSPISELG-DFAKEYADALYDSL-GH-SVLICDRDVYIAVS--GSSKKDY---LNKSIS------EMLERTMDQRS---SVLESDAKSVQ--LV--N------G---IDEDMNSYTVGPIV------------------------------------ANG-DPIGAVVIFSKD-QTMGEV---------------EH--KAVETAAGFLARQME--------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4p5wA | 0.12 | 0.09 | 3.34 | 0.64 | SP3 | ADPAELRTIFLKYAS------------IEKNGEFFMSPNDFVTRYNPKTVELLSGVVDQTKDGLISFQ--EFAFESVLCAPDALFMVAFQLFDKA-GKGEVFEDVKQVFGQTTIHQH--------------------IPFNWDSEFVQLHF------GKERKRHLTYAEFTQFLLEIQLEHAKQ---------AFVQRDNA--------RTGRVTAIDFRDIMVTIRPHVLTPFVEECLVAAAGGTTSHQVSFSYFNGFNSLLNNMELIRKGTRKDVEVTKEEFVLAAQKGQVTPMEVDILFQLADLYEPRGR-MTLADIAPPNP----DHVGGYKLAVATFAGIENKF------------------GL | |||||||||||||
10 | 5udbA | 0.10 | 0.08 | 2.92 | 0.89 | PROSPECTOR2 | -SSYVKEEILKSANFQDYLP------------------------ARENEFASIYLSAYSAIESDSATLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYF-------KKTIVVLLDELDAMVTKSQDINWTTYENAKL--IVIAVANTMDLPERQLG--------------------------NKITSRIGFTRIMF------TGYTHEELKNII-------DLRLKGLIEIASRKVASVSGDARRALKVCKRAAEIAEK-HYMAGVQTVHITHVMKALKKNGSQEQELGDIVDEIKLLIEVNGSNKFKTLFQQGSDNISEQLRIISWDFLDAGILFKQTMKNDRICCVKLNISVEMNED | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |