Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | TYRQEGDYLIPNLALPDEPEYQIGKYGRMRRNYLKEHRPVLYANLLTSGTLHRHLAEIDQACNERMEIIVSDMARQEDVTEALKAADQMEWVRRMNSIRNRAEEIVLTELV |
1 | 5cwqA2 | 0.08 | 0.08 | 3.18 | 0.94 | SPARKS-K | | SEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGN-KEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLE |
2 | 1fpoA2 | 0.18 | 0.15 | 4.96 | 0.86 | FFAS-3D | | -------------DLASEQHTVRDTAFLMEQLELRE----ELDEIEQAKD-EARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTCRKLRFLDKLRSSAEQ-LEEKLL |
3 | 5kh1A | 0.14 | 0.09 | 3.10 | 0.28 | HHpred | | ---------------------WFSLW-GPWHAVLKRTEADRWAQAEE-----QKYEMLENEYPQR----VADRLKASGLS---GDADAEREAGAQ--VMRETEQQIYRQL- |
4 | 3ih4A | 0.11 | 0.11 | 3.88 | 0.66 | MUSTER | | VTEKLQKEFENFLKNRNRDIFDFERWIEKKLEYSASH-PEEADFLITLVSLRKRILLDLEKSQRVFFDFVREKLKDLDLAEDV---TEEIALKFLWFFSGFEEVYLRTYQG |
5 | 4q25A | 0.09 | 0.07 | 2.72 | 0.52 | CNFpred | | -------------------------EVRHIGSQVQKMVQEALDAFARFDDLALSVAQYDKTVDREYKTALRELVTYMMEDPISRVLNIIWALRSLERIGDHARNIAELVIY |
6 | 1vt4I3 | 0.17 | 0.17 | 5.62 | 0.95 | HHsearch-2 | | EYSIVDHYNIPKTFDSDIPPYLDQYFYSHIGHHLKNIHPERMTLFRMVFLDFRFLEQKIRHDSPKYERLVNAILDFLKIEENLICSKYTDLIALMAEDEAIFEEAHKQVQR |
7 | 3nxcA2 | 0.10 | 0.10 | 3.65 | 0.75 | Neff-PPAS | | --EFIEDSLITRINLILKDEKDLRLIVLLLLGFGERN-PGLTRILTGHARLQGRINQLFERIEAQLRQVLREKRMREGGYATDETLLASQILAFCEGMLSRFVRSEFKYRP |
8 | 4ar8A3 | 0.14 | 0.11 | 3.67 | 0.58 | HHsearch | | AGSTRTS-VLPGLSADKLLHSKYSKYGYAFSDYMYNNNKKLFSDLVSNNDVKGYIEESSKDSNKDYEYHMENLVNNYNYT------IPLV--------------------- |
9 | 4tqlA2 | 0.15 | 0.10 | 3.35 | 0.72 | SP3 | | ----------------------------MKKLYDEAKKEQMIQQIKQGGD-KQKMEELLKRAKEEMKKVKDKMEKAKQVAEELIKK-ILQLIEKAKEIAEKVLKG------ |
10 | 2iu5A2 | 0.09 | 0.07 | 2.77 | 0.53 | PROSPECTOR2 | | ----------------NSDYYGWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQ---WENLLDKVIFDQEKKSDYHWSDLEKSFIESIIREKLYSQIVNLLLIKIFE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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