Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | EKTVKRIKAKYPEGTRVELVHMDDPYTKIPEGTLGTVQVVDDTGTIHVKWDNGSSLGIVYGEDSCRKI |
1 | 2jngA | 0.15 | 0.15 | 4.93 | 1.46 | SPARKS-K | | NTYALYVRDTLQPGMRVRMLD---DYEEISAGDEGEFRQSNNVPPVQVFWETGRTYWVHWHMLEILGF |
2 | 2jngA | 0.16 | 0.15 | 4.91 | 1.11 | Neff-PPAS | | NTYALYVRDTLQPGMRVRMLD---DYEEISAGDEGEFRQSNNVPPVQVFWESTGRTYWVHWHM-LEIL |
3 | 2jngA | 0.22 | 0.19 | 6.04 | 1.01 | SP3 | | NTYALYVRDTLQPGMRVRMLD---DYEEISAGDEGEFRQSNNVPPVQVFWESGRMLEILGFEE----- |
4 | 2d6fA1 | 0.18 | 0.16 | 5.25 | 1.22 | SPARKS-K | | GRARKFLESSIDVGDMVLVEKPDVTYLDRADDA--------DDRHIVLKLENGYNIGVEISDARIELL |
5 | 2jngA | 0.17 | 0.16 | 5.29 | 0.61 | FFAS-3D | | -TYALYVRDTLQPGMRVRM---LDDYEEISAGDEGEFRQSNGVPPVQVFWESTGRTYWVH-WHMLEIL |
6 | 5ftbA3 | 0.25 | 0.22 | 6.84 | 0.64 | HHpred | | ----CDLHLKLRVGARVMSLVN-DSLKGYYNGMLGIVTALED-NVITVRMDNGRTIKFERY--TWSNT |
7 | 5ftbA | 0.24 | 0.24 | 7.32 | 0.92 | MUSTER | | SSIPCDLHLKLRVGARVMSLV-NDSLKGYYNGMLGIVTALED-NVITVRMDNGRTIKFERYTWSNTQY |
8 | 2djzA | 0.22 | 0.19 | 6.04 | 0.80 | CNFpred | | MDILNLVRDNMILGVRVKILGD--------GSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL |
9 | 2jngA | 0.22 | 0.19 | 6.04 | 0.56 | HHsearch-2 | | NTYALYVRDTLQPGMRVRMLDD---YEEISAGDEGEFRQSNNVPPVQVFWESGRTLEILGFEE----- |
10 | 3rirA3 | 0.14 | 0.12 | 4.01 | 1.06 | Neff-PPAS | | -EIREEYNAANIWNRTLLFTEND-------KQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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