>PF14158 (250 residues) IVMLGMLVVVPLGLRLVGSPALHRIRRLWPLLAAPGAVALWLPRGGTATALAAVYALGTL ALALHAPARLLRTRSLAPAEVAVLTALAAPSVAGLALVAERGGHELFGFDLEILALTVPH FHFAGFAAALVAGLVCRAAGRRPAGRFAALSVPLGTLLVLTGYFVDDWAELAGAVVLTAG MWTVALLTWQDVRDDRQDRTTRALLAVSAAVLVATMLLALSWALGEATGIPHPSLTWMAA THGLGNALGF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | IVMLGMLVVVPLGLRLVGSPALHRIRRLWPLLAAPGAVALWLPRGGTATALAAVYALGTLALALHAPARLLRTRSLAPAEVAVLTALAAPSVAGLALVAERGGHELFGFDLEILALTVPHFHFAGFAAALVAGLVCRAAGRRPAGRFAALSVPLGTLLVLTGYFVDDWAELAGAVVLTAGMWTVALLTWQDVRDDRQDRTTRALLAVSAAVLVATMLLALSWALGEATGIPHPSLTWMAATHGLGNALGF | |||||||||||||||||||
1 | 6ei3A2 | 0.07 | 0.07 | 2.83 | 1.13 | SPARKS-K | LIAFGAGGIKPLVASFMVQSNKHRAKVVFDAFYWIINFGSLFLLIPLALKHAFGIPGILMFIATAVFWLGRKRYVRVPLPPKVTPFFSLFDQKASTWVLQGREMRM-PAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLRRMTSGIAFSGVAWIAVGAIQVAMDLPYALLTFGEVLVSATGIEFAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRTSHIADTGLSEAAFLMFFFAAFAFLAA | |||||||||||||
2 | 6eyuA | 0.12 | 0.10 | 3.40 | 1.19 | FFAS-3D | ---------------------------------VYEAITA-GGFGSQPFILAYIITAMISGLLFLYLPRKLDV-----PQKFGIIHFFIVVWSGLMYTNFLNQSFL------SDYAWYMDWMVSTPLILLALGLTAFHGADTKRYDLLGALLGAEFTLVITGLLAQATPYYVGVLLLLGVVYLL-AKPFREIAEESSDGLARAYKILAGYIGIFFLSYPTVWYISGIGSLNILDPTQTSIALVVLPFF-- | |||||||||||||
3 | 3rkoB | 0.13 | 0.13 | 4.44 | 1.29 | CNFpred | RFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYNGAAAMKAFVVTRVGDVFLAFALFILYNEGTLNFREMV-LMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHHEQ-IPLVYLCFLVGGAALSAL | |||||||||||||
4 | 3mk7A1 | 0.09 | 0.06 | 2.16 | 1.28 | HHsearch-2 | -----------------------------------------------------------------------TSTSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAPLNPWTSFGRLRPLHTNAVAFGGCALFATSYYSVQAPKLAAFTFWGWQLVILLAAISLPLGFELEWPIDILITIVWVAYAVVFFGTLAKRKVKHVGNWFFGAFILTVA------ILHVVNNLEIPVTKSYSLY------------ | |||||||||||||
5 | 5t77A1 | 0.05 | 0.05 | 2.25 | 1.10 | Neff-PPAS | --SSILFSIATFFSRILGLFRDVLFAKYFGVSYELDAYFIAIMFPFFLRKVFGEGA-----MSSAFVPLYSEKSGEEKDKFLSSVINGFSLIILALVILSYFFPAGSSHETKILAKKLLLITSPSIYFIFLWAISYSILNTNNKFFWPALTPSISNITIIIGTFLSTKYGIISPTIGFLIGSILMFFSIIKSIIKHKIKHFPHFLKLFFPTFMTMVVSQINTVVDMNVVSFYDKG--SISYLQYASRF-- | |||||||||||||
6 | 3mk7A1 | 0.08 | 0.05 | 2.06 | 1.19 | HHsearch | ---------------------------------------------------------------------TSTAYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAFLNPWTSFGRLRPLHTNAVAFGGCALFATSYYSVQAPKLAAFTFWGWQLVILLAAISLPLGFELEWPIDILITIVWVAYAVVFFGTLAKRKVKHVGNWFFGAFILTVAI------LHVVNNLEIPVTA-------MK-SYSLY-- | |||||||||||||
7 | 3wdoA | 0.08 | 0.08 | 3.04 | 1.12 | SPARKS-K | RALQGSGAIAAAVMALLSDLREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKALFWMIAILATTGIALTIKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQT-QFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMF---DGQGVFLAGAMLAAVWL | |||||||||||||
8 | 1bm1A | 0.10 | 0.08 | 2.93 | 1.17 | FFAS-3D | -----------------------------------------------------IWLALGTALMGLGTLYFLVKGMGVDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADWLFPLLLLDLALLVDAD--QGTILALVGADGIMIGTGLVGARFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGS-EGAGIVPLNIETLLFMVLDVS-- | |||||||||||||
9 | 4he8F | 0.12 | 0.11 | 3.98 | 1.28 | CNFpred | RFFAYFNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYYADSARKAFIVNRIGDLGFMLGMAILWALGTLSISELK-LALAGLLLFLGAVGKSAQIPLMVWGPTPVSALIHAATMVTAGVYLIARSSFLYSVL-PDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVG--------AYWVALFHVFTHAFFKALLFLASGSVIHALGRKMGGLWRWHALIGALALGGL | |||||||||||||
10 | 4xydA1 | 0.12 | 0.06 | 2.13 | 1.16 | HHsearch-2 | ----------------------------------------------------------------------MKYQSQSIALVYFAVALGLFAIQVSGGLLLGWIPNFLSEILPFNIVRMLHTNSLVWLLLGFMGAAYFVIPSPLLAYLQLAIMVLGTLGVVVTYLFNLEQPVWVKMGIVVAALIFMYNISMTVLQG-R-K--------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |