Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LYNVTINIDESVHQQWLQWMQEKHIQDVLATGKFSSARLIKVLVDEEMGGTTYSVQYTTDSKETLQKYYTEDAPRLREEGLKLFGDKMLAFRTELEV |
1 | 4zosA | 0.05 | 0.05 | 2.34 | 1.48 | SPARKS-K | | HIICELRCEPENRERVKELVLKFVEPARLE-TGCLYYDLYQK----IDEPDTFYIIDGWVNQEAVTSHAEPHVAEVMSDLQPLLTFGPSISLITRVS |
2 | 2jdjA | 0.09 | 0.08 | 3.16 | 1.11 | FFAS-3D | | TIIHKIRLFDVQADAFEFWVQNVDYATCPDLPSVVRFDVHRASLQANAP-YHYVEVIKITDRAAFDADETSTFAGLVQA----FSRAEVVEELAGE- |
3 | 2jdjA | 0.08 | 0.07 | 2.89 | 1.61 | MUSTER | | TIIHKIRLDVAQADAFEFWVQNVDYATCPDLPSVVRFDVHRASLQANAP-YHYVEVIKITDRAAFDADETSTFAGLVQAFSR---EVVEELAG--QL |
4 | 3mcsA | 0.03 | 0.03 | 1.78 | 1.08 | CNFpred | | AVYTVIDVKPENDKEFAEIIK-NIVETTFNEEGTLLVYLGTDRR----NFNKWCLFEVYKDIDSYLNHRSAYFKDYITQTKDMIKKRAELQVLKIEN |
5 | 4zosA | 0.05 | 0.05 | 2.33 | 1.38 | Neff-PPAS | | HIICELRCEPENRERVKELVLKF-VEPARLETGCLYYDLYQK----IDEPDTFYIIDGWVNQEAVTSHAEPHVAEVMSDLQPLL-TFGPSISLITRV |
6 | 2jdjA | 0.09 | 0.08 | 3.13 | 1.35 | HHsearch | | TIIHKIRLFDVQADAFEFWVQNVDYATCPDLPSVVRFDVHRASLQ-ANAPYHYVEVIKITDRAAFDAD-ETTFAGLVQAFSR--AEV----VEELE- |
7 | 2jdjA | 0.08 | 0.08 | 3.22 | 1.45 | SPARKS-K | | TIIHKIRLFDVQADAFEFWVQNVDYATCPDLPSVVRFDVHRASLQANAP-YHYVEVIKITDRAAFDADETSTFAGLVQAFSRAEVVEELAGEQLGSG |
8 | 5k9fA | 0.14 | 0.13 | 4.56 | 1.03 | FFAS-3D | | LVEQTYWLKPGSVSTFLSLYEAEGLAIQAGALG----RLLGYYFSETGDLNRVIQLWGFDSFEDRTRRKAILSGPQWKSFVGRAGSMIERQSTEL-- |
9 | 5b08A | 0.15 | 0.14 | 4.89 | 1.59 | MUSTER | | KHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVTQKKEEGYTHIVEVTFESVETIQDYIIPAHVGFGDVYRSFW-EKLLIFDYTPRK |
10 | 3f44A | 0.03 | 0.03 | 1.79 | 1.07 | CNFpred | | MRLIKVEVKDADAEKFSHAVKKEMTTSMASEPGMEIMMSGTNID----NPNEWYFIEVYANDEAYDIHVKTHYKEYIEETDGMVKRDVKTLVRDTLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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