Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | IRKRYWTYALVQIHEAHGNPGSFSNVNPSTDNWINGFFGIGGFYLCCVANFDSARSEVVFGRADKDENKAAFDALYQHKTEIESKLGTELQWNRGDDIKSSKVFIQLDGVSIENEDDWPRMAKFHAEWSKKFYDVIVPYI |
1 | 2a8eA | 0.10 | 0.10 | 3.69 | 1.06 | SPARKS-K | | KLTALGEHFAPTLSALTGDEFPHRSVNPPADSWVAFANSKKLPHFQIGLWESHVFVWFAIIYESP-IKEEYGKLLEVNQETITKNIPDSFVWSADPGVHKLLCGIQLQKEELNNNQEFLQRIDDAFKQLAFLYRLTQKVT |
2 | 1jyoA | 0.07 | 0.06 | 2.65 | 1.02 | MUSTER | | -----LQAHQDIIANIGEKLGL--PLTFDDNNQCLLLLD-SDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAE----TLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYA |
3 | 1jyoA | 0.07 | 0.06 | 2.65 | 1.15 | SP3 | | -----LQAHQDIIANIGEKLGL--PLTFDDNNQCLLLLD-SDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAE----TLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYA |
4 | 1jyoA | 0.09 | 0.08 | 3.04 | 0.91 | SPARKS-K | | --LQAHQDIIANIGEKLGLPLTFDD----NNQCLLLLDS--DIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAE----TLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYA |
5 | 2a8eA | 0.11 | 0.11 | 3.87 | 0.84 | FFAS-3D | | --TALGEHFAPTLSALTGDKHARRSVNPPADSWVAFANSKRGYHFQIGLWESHVFVWFAI-IYESPIKEEYGKLLEVNQETITKNIPDSFVWSADHTKPGVHCGIQLQKEELNNNQEFLQRIDDAFKQLAFLYRLTQKVT |
6 | 2a8eA | 0.11 | 0.09 | 3.34 | 0.31 | HHpred | | -LTALGEHFAPTLSALTG-DE-FRSVNPPADSWVAFANSKRGPHFQIGLWESHVFVWFAIIYESP-IKEEYGKLLEVNQETITKNIPDSFVWSADHTKPGV-HK-----QS-EDKEQLKTLFERLQTV------------ |
7 | 3kxyA | 0.05 | 0.04 | 2.09 | 0.87 | MUSTER | | LTSKVNRLLAEFAGRIG-----LPSLSLDEEGMASLLFD-EQVGVTLLLLAERERLLLEADVVGIDVLGGIFRQLASFNRHWHRF-DLHFGFDE--LTGKVQLYAQILAAQL-TLECFEATLANLLDHAEFWQRLLPCAS |
8 | 5z38A | 0.09 | 0.09 | 3.24 | 0.81 | CNFpred | | --SSRSELLLDRFAEKI----GVGSISFNENRLCSFAID-EIYYISLSDANEYMMIYGVCGKFP-TDNPNFALEILNANLWFAENGGPYLCYESG--AQSLLLALRFPL-DDATPEKLENEIEVVVKSMENLYLVLHNQG |
9 | 2a8eA | 0.11 | 0.10 | 3.63 | 0.41 | HHsearch-2 | | KLTALGEHFAPTLSALTG-DE-FRSVNPPADSWVAFANSKRGPHFQIGLWESHVFVWFAIIYESP-IKEEYGKLLEVNQETITKNIPDSFVWSADHTKPGVH-K-----QS-EDKEQLKTLFERLQTFLQRIDDAFKQLA |
10 | 1jyoA | 0.05 | 0.05 | 2.26 | 0.93 | Neff-PPAS | | -LQAHQDIIANIGEKLGLP------LTFDDNNQCLLLLD-SDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAE----TLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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