Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | AVTTTLRNLLTRGLGSELGSGGVTTRPPDKARENNDPNQVNLFLYHLMPDPAWRNQEMPNRRPGENSPSPLPLKLFYLMTAYGKENDDTLAHRLLGRAMQILHDNTMLSADHIRAALPESDLHNQVERIRITLQPLTLEETSKLWSSFQTQYRISATYEVSVVLIDSQRPSVTPLPVL |
1 | 6j0fA | 0.20 | 0.18 | 5.75 | 1.72 | SPARKS-K | | DVNKAMDAMLRAYLNQ---DIAIRFDLPELDT-MQSDAMVSIFLYDIHEDLQLRSAESRGFDVGRLLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQL-----------AGIPG--AYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTVPV-SLNDGQDSATPVT |
2 | 6j0fA | 0.19 | 0.17 | 5.60 | 2.01 | FFAS-3D | | DVNKAMDAMLRAYLN---QDIAIRFDLPEL-DTMQSDAMVSIFLYDIHEDLQLRSAESRGFDVYAGLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQLA-------------GIPGAYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTVP-VSLNDGQDSATPVT |
3 | 6j0fA | 0.20 | 0.18 | 5.75 | 2.90 | HHpred | | DVNKAMDAMLRAYLN---QDIAIRFDLPELDT-MQSDAMVSIFLYDIHEDLQLRSAESRGFVYARLLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQLAG--IPG-----------AYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTV-PVSLNDGQDSATPVT |
4 | 6j0fA | 0.19 | 0.17 | 5.60 | 1.57 | MUSTER | | DVNKAMDAMLRAYLNQ---DIAIRFDLPELDT-MQSDAMVSIFLYDIHEDLQLRSAESRGFDVYALLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQLA-----------GIPG--AYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTVP-VSLNDGQDSATPVT |
5 | 3fz2A | 0.12 | 0.08 | 2.99 | 0.69 | CNFpred | | MKHTELRAAVLDALEKHDTGATFFDGRPAVFDE-ADFPAVAVYLTGAEYTGE---------------SDTWQAELHIEVFLPAQVPASELDAWMESRIYPVMSD-----IPALSDLITSM----VASGYDYRRDD--------------AGLWSSADLTYVITYEM------------ |
6 | 6j0fA | 0.20 | 0.18 | 5.75 | 4.16 | HHsearch-2 | | DVNKAMDAMLRAYLN---QDIAIRFDLPELDT-MQSDAMVSIFLYDIHEDLQLRSAESRGFVYAGLLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQLAG--IPG-----------AYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTV-PVSLNDGQDSATPVT |
7 | 6j0fA | 0.20 | 0.18 | 5.75 | 1.83 | Neff-PPAS | | DVNKAMDAMLRAYLNQD---IAIRFDLPEL-DTMQSDAMVSIFLYDIHEDLQLRSAESRGFDVGRLLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQLA-------------GIPGAYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTVP-VSLNDGQDSATPVT |
8 | 6j0fA | 0.20 | 0.18 | 5.75 | 6.16 | HHsearch | | DVNKAMDAMLRAYLN---QDIAIRFDLPELDT-MQSDAMVSIFLYDIHEDLQLRSAESRGFVYARLLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQLAG--IPG-----------AYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTV-PVSLNDGQDSATPV- |
9 | 1ro5A | 0.09 | 0.08 | 2.99 | 0.64 | PROSPECTOR2 | | GLLGEMHKLRAQVFKERKGWDVSVIDEIDGYDALSPDGQVCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINKGSLGFSDCTLEAMRALARYSLQNDI-------------------QTLVTVTT----VGVEKMMIRAGGPHLKIGIERAVALRIELNAKGGVLVEQR |
10 | 6j0fA | 0.20 | 0.18 | 5.74 | 1.94 | SAM | | -VNKAMDAMLRAYLN---QDIAIRFDLPELDT-MQSDAMVSIFLYDIHEDLQLRSAESRGFVYAGLLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQLAG--IP------------AYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTV-PVSLNDGQDSATPVT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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