Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | LNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGAT |
1 | 4r80A | 0.23 | 0.23 | 7.32 | 1.06 | SPARKS-K | | EEEEKRRAKQVAKQVRRVQKGNTIRVELEITENGKKTNITVEVEGNT |
2 | 5e4wC | 0.24 | 0.23 | 7.28 | 1.20 | MUSTER | | GVHVAEDVAKDYEDG--LEYAVAESVIGKRVGDDGKIEYLVKWTDMS |
3 | 5e4wC2 | 0.37 | 0.21 | 6.32 | 1.11 | Neff-PPAS | | --------------------AVAESVIGKRVGDDGKIEYLVKWTDMS |
4 | 4o9iX2 | 0.21 | 0.21 | 6.74 | 0.90 | SPARKS-K | | EKSRKRKNPKFAEEERFYIKPEWIRILNHSVDKKGHVHYLIKWRDLP |
5 | 3g7lA | 0.35 | 0.19 | 5.72 | 0.49 | FFAS-3D | | ---------------------EVEDILADRVNKNGINEYYIKWAGYD |
6 | 5e4wC | 0.29 | 0.26 | 7.79 | 0.46 | HHpred | | -VHVAEDAKDYEDG----LEYVAESVIGKRVGDDGKTEYLVKWTDMS |
7 | 2b2wA2 | 0.16 | 0.15 | 4.94 | 0.95 | MUSTER | | YYNCQQELTDDLHKQYQ----IVGRIIAHSNQAAGYPDYYCKWQGLP |
8 | 2r5vA | 0.10 | 0.09 | 3.13 | 0.59 | CNFpred | | VENLEVAAFSWVDKY-------AFAVAGTSRSA-DHRSIALRQGQVT |
9 | 3deoA1 | 0.27 | 0.15 | 4.57 | 0.68 | HHsearch-2 | | ---------------------EVNKIIGSRTAGEGAMEYLIEWKDGH |
10 | 4o9iX2 | 0.20 | 0.19 | 6.15 | 1.07 | Neff-PPAS | | -DEEKSRKRKNKDPKFAEEEKPEWRILNHSVDKKGHVHYLIKWRDLP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|