>PF14057 (327 residues) FESYERRIGQITPVLEKYGIESLEAARDLCKSKGFDPYEITKETQPIAFENAAWAYTLGA AIALKKGCTKAADAAEAIGEGLQAFCIPGSVADDRKVGLGHGNLGAMLLREETKCFAFLA GHESFAAAEGAIKIAEKANKVRKEPLRVILNGLGKDAAYIISRINGFTYVQTKFDYYTGK LEIVKETPYSDGPRAKVKCYGSDDVREGVAIMHHEGVDVSITGNSTNPTRFQHPVAGTYK KECVEEGKKYFSVASGGGTGRTLHPDNMAAGPASYGMTDTMGRMHSDAQFAGSSSVPAHV EMMGLIGMGNNPMVGATVAVAVAVEEA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FESYERRIGQITPVLEKYGIESLEAARDLCKSKGFDPYEITKETQPIAFENAAWAYTLGAAIALKKGCTKAADAAEAIGEGLQAFCIPGSVADDRKVGLGHGNLGAMLLREETKCFAFLAGHESFAAAEGAIKIAEKANKVRKEPLRVILNGLGKDAAYIISRINGFTYVQTKFDYYTGKLEIVKETPYSDGPRAKVKCYGSDDVREGVAIMHHEGVDVSITGNSTNPTRFQHPVAGTYKKECVEEGKKYFSVASGGGTGRTLHPDNMAAGPASYGMTDTMGRMHSDAQFAGSSSVPAHVEMMGLIGMGNNPMVGATVAVAVAVEEA | |||||||||||||||||||
1 | 5cwcA | 0.19 | 0.10 | 3.36 | 0.74 | SPARKS-K | EELRERLVKICVENAKRKGDD-TEEAREAAREAFELVREAAERAG-IVLELAIRLIKECVENAQREGY-DISEACRAAAEAFKRVAEAAKRAG-----ITSSEVLELAIRLIKECVENAQREACRAAAEAFKRVAEAAKRASSETLKRAIEEIRKRVEEAQREGN--------------------------------------DI-----------------------SEACRQAAEEFRKKAEELKRR------------------------------------------------------------------------------ | |||||||||||||
2 | 2x6fA | 0.14 | 0.14 | 4.67 | 0.52 | FFAS-3D | ----EDEVTQALWMLANWAPMDVEDALELLSPTFTHPQVRKYAVQALKYEDPRHIVHLHLCTFLIQRACTNATLANYFYWYLSIEVEEQDERAHDMYAMVLKMFLKVLENGNFNLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMYITKIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAIFKHGDDLRQDQKLLRRENLDLKLTPYKVLATSSKHGVDSCTVAEVLAREGNIYCVITYLGVG-DRHLDNL--------LLTTNGKLHIDGYILGRDPPPMKLEMVEAMGGISSEHHHEFRKQCYTA--- | |||||||||||||
3 | 4z3wA | 0.15 | 0.10 | 3.49 | 0.38 | HHpred | ----LDFGLRIAQKATEYGLDGFSAPQVMLLEKGILKD---SDFPGLPEGNEERFFYLLDKIVNRDGIGDTYWAAQEIGNGAEDYAHNKLPLKLSMLYLMYGEKINITQI---EGQFPQAPFVDIQVPDKKIFLETVDMCCDQEMMHYIDDALGHNYPKFIAAGAGIEM-------DTEKLKKAAKRYR----------------TLVRAFNIRRGMRR---VDEQPPANHWKRFPELEKELLD----SYYKLKGWNDDGIP----------------------------------------------------------------- | |||||||||||||
4 | 3pnzA | 0.11 | 0.10 | 3.53 | 0.57 | MUSTER | VCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGK--TIV---------------DATAV-DYGRRVLDVAQISKETG--IQIVGTAG-FNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGTPYKYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEIEILKQENI-PLEYLSIGMDRNLD-PYYHKQVAKTGAFMSFDGIAKIKYA-PESARIAAILYLVSEGEDQILVSGDTARKTYYKHYGHGPGLEYI-AKKWVPRFIDEANEKGFDG-EKLVKKF----FVDNP------ARCFTFKK- | |||||||||||||
5 | 4oskA | 0.14 | 0.06 | 2.18 | 0.64 | CNFpred | -------PEQVVAIASNSGKQALETVQALLPVLGLTPEQVVAIASNSGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHGKQALE-------------TVQRLLPVLCQLTPQQVVAIASNGGKQALETVQRLLPVLCGLTPQQVVAIASNSGKQALETVQRLL------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 4z3wA2 | 0.12 | 0.04 | 1.29 | 0.33 | HHsearch-2 | TYMMKCFTKLTYTMAAYSDLDFGLRIAQKATEYGLDGFSAPKDFPGLPEGNEERFFYLLDKIVNRDGINGTYWAAQEIGNGAEDYAHNN-I-----KKHE------------------QLPL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3e2vA | 0.09 | 0.09 | 3.26 | 0.61 | Neff-PPAS | KQYHPADYVKLLERAAQRHVAESQSAIELVSSVKDLSPLKLYHTIGVHPCCVNEFAEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSS----KEMQKVFFEEQLKISCLNDKLSSY---PLFLHMRSACDDFVQILERFVVGFTDEKDTFQLQKLSSSSGFYKFHPDRKLVVHSFTG-SAIDLQKLLNLSNIFIGVNGCSLRT--------EENLAVVKQIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVRDFEYPAFKSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKD | |||||||||||||
8 | 2k5eA | 0.16 | 0.03 | 0.91 | 0.48 | HHsearch | FAQALQTHPGVAGVLRSYNLGCNESLEQGANAHGLNVEDILRDLNALALEHHHHHH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4xfkA | 0.13 | 0.11 | 3.90 | 0.55 | SP3 | SGPQASTGLLYRAAVLYQ----LGKINEAGGFNGEKIQILEYDNQ------GGPVGAADRVKAAIAGAQSSSAVAGQITEDVRKY-----NLRNKGKEVNLGAEALELTGSKCHFYHFRFSPNAAIRFKTVAQGMKDKGILGE---RAYS--INQNYSWGVDVENTVVANAKEIG-----YEVVDKTLHEVNK--------IQDFSPYVAKIQAANVDTVFTGNWSND-------LLLLMKAASGAGLKAKFATSFLDQPGNIG----NAGAIAEGHI-------VSTPFNPEANGEASMAFAEDYKTGHYPSYVGLQLFGEALKNV | |||||||||||||
10 | 1ykdA | 0.09 | 0.09 | 3.24 | 0.93 | PROSPECTOR2 | VTEVEQKLQIVHQTLSMLDSHGFENTLKTGELLGAAGEGDRSLEIRIPADKGIAGEVAKQVVNIPFDFYHDPRSIFAQKQEKITGYRTYTMNKLKPYSPPDALLAERIDNQGFTSADEQLFQEFAPSIRLILESSRSFYIATQKQRAAALEDTLKRVMDEAKELMNADRSTL-WLIDRDRHELWTKITQDNGSTKELRVPIGKGF---AGIVAASGQKLNI-----PFDLYDHPDSATAKQIDQQNGYRTCSLLNGDQENKKKTGEFPPYNPETWP---------IAPECFQASFDRNDEEFMEAFNI----QAGVALQNAQLFATV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |