Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | RTLCSSTLIGEFLVIGFAALVAMKDDDLSTSTVWTVSGIAMFLCLVLCGMVTRPGGIALGWVLQVALIASGFAVPTMFFLGAVFAALWWASVHYGRKIDEAKAR |
1 | 2vpyC2 | 0.12 | 0.12 | 4.09 | 1.12 | SPARKS-K | | NGLMAGLFPLTALVLALGLAALLKSPWALFPLRVLAGASLLLALLYPLTLPPEARGHLLEEAGYGLFLLLGLGTFLAPWAGLLAAAGLRALLVLAGQWQGL--- |
2 | 5ogeA2 | 0.14 | 0.13 | 4.60 | 1.13 | MUSTER | | ---VPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWGSSTTYSMVGALNKLPIALSGLIFNFLSILSIFIGFLSGIIYAVAKQKKQQAQ- |
3 | 6a2jA3 | 0.01 | 0.01 | 1.14 | 1.09 | SPARKS-K | | ---PLQIGKKMQFHMIGILIYSYIVVL-------LLFVWIIVAAVHAITSYKQKQIFWGWISCLIFITLQALSGIMIVYFIACLFGVLCYFLLLIARFRYES-- |
4 | 5ogeA2 | 0.13 | 0.12 | 4.36 | 0.97 | FFAS-3D | | -AVPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWGDQSSTTYSMVGALKLPIALSGLIFFFLSILSIFIGFL-SGIIYAVAKQKKQQAQ |
5 | 2zw3A | 0.13 | 0.09 | 3.01 | 0.23 | HHpred | | --------------------ILGGVNKHSTGKIW-LTVLFIFIMILVAAVHYFPISHIRLWALQLIFVST----PALLVAM--------HVAYRRHEKKRKFI- |
6 | 6a2jA3 | 0.16 | 0.14 | 4.81 | 1.08 | MUSTER | | QFHMIGILIYSYIVVLLLFVWIIVA----AVHAITSYKQIFWGWISCLIFI--TLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYES--- |
7 | 4he8F | 0.10 | 0.10 | 3.58 | 0.96 | CNFpred | | ALIHAATMVTAGVYLIARSSFLYSV--PDVSYAIAVVGLLTAAYGALSAFGQKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHALG |
8 | 6adqD | 0.15 | 0.09 | 2.90 | 0.57 | HHsearch-2 | | HMPIGVMHIGGLLSAAFLLVMMRGNHVGHVEDWFLIGFAAVIVALVGRNWWLRRRGWIR--------------------------------------------- |
9 | 5ogeA2 | 0.14 | 0.13 | 4.60 | 0.98 | Neff-PPAS | | ---VPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWGDSTTYSMVGALNKLPIALSGLIFNFLSILSIFIGFLSGIIYAVAKQKKQQAQ- |
10 | 5zazA | 0.12 | 0.06 | 2.05 | 0.34 | HHsearch | | --------------------PVDESRESV---------------------AGPNIAAIVGG-----------TVAGIVLIGILLLVIWKALIHLSDLREYRRF- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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