Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VGTWKLVSTERVSANGERLPPTSTNQIGFLIYDSAGNMGVTIMQGGRQKYAGAQPTPEEARAALTSYTSYFGTFIVNAAEGVVTHRLQGSLNPGMATDQRRGFELKGNLLTLKPPRGANGVQSQLTWER |
1 | 4gzvA | 0.19 | 0.16 | 5.02 | 1.58 | SPARKS-K | | KGIWQLCHYVSESPDVPGA---LKPSNTFKVLSDDGRIVNFTIIPGADAI-----------------ITGYGTYKQLTDD-SYKESIEKNIHLPLDNDNILEFEIKDNHLKYFIKSDLNGTWYYETWKR |
2 | 4gzvA | 0.18 | 0.15 | 4.81 | 1.24 | FFAS-3D | | KGIWQLCHYVSESPDVPGA---LKPSNTFKVLSDDGRIVNFTIIPGAD-----------------AIITGYGTYKQL-TDDSYKESIEKNIHLPLNQDNILEFEIKDNDYFIKSDLNGNELNTWYTWKR |
3 | 4gzvA | 0.20 | 0.16 | 5.22 | 1.45 | HHpred | | KGIWQLCHYVSESPDVPGAL---KPSNTFKVLSDDGRIVNFTIIPG-----------------ADAIITGYGTYKQLTD-DSYKESIEKNILP-LDNDNILEFEIKDNDLHLKYFILNGELNYYETWKR |
4 | 4gzvA | 0.19 | 0.16 | 5.23 | 1.72 | MUSTER | | KGIWQLCHYVSESPDVPGALK---PSNTFKVLSDDGRIVNFTIIP------GADA-----------IITGYGTYKQLTDD-SYKESIEKNIHLPLDQDNILEFEIKDNHLKYFIKSDLNGTWYYETWKR |
5 | 4iabA | 0.14 | 0.12 | 3.97 | 1.31 | CNFpred | | AGIWQLCHYVSEIPDVPGILK---PSNTFKVLSDDGRIVNFTMIPGKD-----------------AIITGYGTYQQLTD-NSYKESIEKNILPMLDHKNILEFEIGDDGVMYLKY-NELNTWFHETWKR |
6 | 4gzvA | 0.20 | 0.16 | 5.22 | 2.31 | HHsearch-2 | | KGIWQLCHYVSESPDVPGAL---KPSNTFKVLSDDGRIVNFTIIPG-A----------------DAIITGYGTYKQLTD-DSYKESIEKNILP-LDNDNILEFEIKDNDLHLKYFKDNGELNYYETWKR |
7 | 4gzvA | 0.19 | 0.16 | 5.24 | 1.31 | Neff-PPAS | | KGIWQLCHYVSESPDVP---GALKPSNTFKVLSDDGRIVNFTIIPG-----------------ADAIITGYGTYKQLTDDSYKESIEKNIHLPLDNQDNILEFEIKDNHLKYFIKSDLNGTWYYETWKR |
8 | 4gzvA | 0.19 | 0.16 | 5.01 | 3.22 | HHsearch | | KGIWQLCHYVSESPDVPGAL---KPSNTFKVLSDDGRIVNFTIIPG-A----------------DAIITGYGTYKQLTD-DSYKESIEKNILP-LDNDNILEFEIKDNDLHLKYFKDNGNENYYETWK- |
9 | 4gzvA | 0.18 | 0.15 | 4.81 | 0.91 | PROSPECTOR2 | | KGIWQLCHYVSESPDVPGAL---KPSNTFKVLSDDGRIVNFTIIPGAD-----------------AIITGYGTYKQLTD-DSYKESIEKNIHLPLDNDNILEFEIKDNKYFIKSDLNGNELNTWYTWKR |
10 | 4gzvA | 0.20 | 0.16 | 5.22 | 0.77 | SAM | | KGIWQLCHYVSESPDVPGALK---PSNTFKVLSDDGRIVNFTIIPG-----------------ADAIITGYGTYKQLTD--SYKESIEKNILP-LDNDNILEFEIKDNDLHLKYFIKSGELNYYETWKR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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