Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | EQALAGIDDAHRGDPNIVTVDGSEIPYELHYANKMTKYLEKHNPSASEALKLAVRAQHLRRWEIPRSSYPMTKPGYFSWRTALKNRQADIADEICRNCGYDEDAAGRVAALVRKENMKRDEECQVLEDVACLVFLDDQFEKFEKEHDEEKIVGILKKTWAKMSERGHELALQIDMSDRAKGLV |
1 | 5dqvA | 0.13 | 0.11 | 3.78 | 1.22 | SPARKS-K | | DQIRTWVQSVLTD---------------WLHISRVADLAVYIGEKELFIVETAALVHDLIDVKLPDTIRLS----------------VSEVYNQLVTFGIGKEDADRVIHIITKMS-PLSIEGKVVQDADRLDAGAVGIARAFMFAGAKHFFHKLLRLIDMMTDTARELAEERFMLQYIRQLE |
2 | 2qgsA | 0.08 | 0.07 | 2.63 | 1.64 | FFAS-3D | | ----RKIKKAYE---YKSFHQHDTTGHDIAHVERVYNNACYIAKRENLVIELSSLLHDTVDSKLT-----------------DEILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFQFSGHFAIKHFYEKLFKLTPTAKKLAEEHQFIQYLKQF- |
3 | 2qgsA | 0.08 | 0.07 | 2.77 | 1.52 | HHpred | | ----RKIKKAYEY---KSFHQHDTTGHDIAHVERVYNNACYIAKRDTLVIELSSLLHDTVDSKLT---------D--------EILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFWTEIKHFYEKLFKLKD-LTPTAKKLAEERHI-QYLKQF- |
4 | 2pq7A | 0.12 | 0.10 | 3.49 | 0.90 | MUSTER | | REILNIVREAFK--------DYDDPAHDISHTFRVENASEIASKCDLQKAIIAALLHDIKRPHEALTGVD------------HAESGAEYASGLLPT-GFDISFVAEVSKAIRSHRTPTSLTGKILQDADRLDAIAVAIARVFSYPET------FWTETARKAEDRYSFVVEF---QRFLAEW |
5 | 2pq7A | 0.10 | 0.08 | 3.03 | 0.87 | CNFpred | | REILNIVREAFKDY--------DDPAHDISHTFRVMENASEIAKCDLQKAIIAALLHDIKRPHEA------------LTGVDHAESGAEYASGLLPTMGFDISFVAEVSKAIRSHR--TSLTGKILQDADRLDAIGAVAIARVF-FWTETARKMAEDRYSFVVEFVQRFLAEW---------- |
6 | 2qgsA | 0.07 | 0.06 | 2.49 | 1.22 | HHsearch-2 | | SRKIKKAYEY-KS-----FHQHDTTGHDIAHVERVYNNACYIAKRDTLVIELSSLLHDTVDSKLT-----------------DEILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFFTAIKHFYEKLFKLKD-LTPTAKKLAEERFI-QYLKQFS |
7 | 2qgsA | 0.07 | 0.06 | 2.50 | 0.79 | Neff-PPAS | | SRKIKKAYEYKSF------HQHDTTGHDIAHVERVYNNACYIAKRETLVIELSSLLHDTVDSKLT-----------------DEILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFQFSIKHFYEKLFKLKDLHTPTAKKLAEEIQYLKQFSEWN |
8 | 2qgsA | 0.07 | 0.06 | 2.48 | 1.96 | HHsearch | | SRKIKKAYEY------KSFHQHDTTGHDIAHVERVYNNACYIAKRDTLVIELSSLLHDTVDSKLT---------D--------EILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFFETIKHFYEKLFKLKD-LTPTAKKLAEERHI-QYLKQF- |
9 | 2qgsA | 0.07 | 0.06 | 2.48 | 1.09 | PROSPECTOR2 | | NS--RKIKKAYEYKSF---HQHDTTGHDIAHVERVYNNACYIAKRDTLVIELSSLLHDTVDSKLT-----------------DEILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFQFSGHFNEELHTSLVEELTPTAKKLAE-----ERHQFIK |
10 | 2qgsA | 0.09 | 0.05 | 2.11 | 1.10 | SAM | | ---------------------HDTTGHDIAHVERVYNNACYIAKRDTLVIELSSLLHDTVDS-----------------------LAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAD---------NSAIKHFYEKLFKLKD-LTPTAKKLAE------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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