Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | FCVVYLIALVGNLIILFVIWTDRSLHQPMFYFLAMLSMIDLSLSTATIPKMLGIFWFSLQELCFGCCVAQVFFIHFFTVMESIVLLAMGFDRYVAICNPLRYTMILTNRIIAVIAVIVVIRSLCMIVPIIFLLLRLPYCGHRIIPHTYCEHMGVARLACASIRANVYYGLGNISILFLDVLLIIVSYSRILYAVFHLPSKDARLKALNTCSSHICVIFAFFGPALFSFLTHRFGHNIPQYIHILLANLYVVIPPALNPVIYGIRTKQIQQRVKHLLAKK |
1 | 3d4sA1 | 0.19 | 0.18 | 5.90 | 2.68 | SPARKS-K | | MSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQM----HWYRATHQEAINCYAEETCCDFFTN---QAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLLK--EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRS-PDFRIAFQELLCL- |
2 | 3emlA1 | 0.18 | 0.18 | 5.70 | 2.74 | FFAS-3D | | ELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMN--------YMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAP--LWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSH |
3 | 5zbhA | 0.15 | 0.15 | 4.94 | 4.32 | HHpred | | YGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWRP--NNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPLDAYKDKYVCFDQFP-----SDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNISSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFC |
4 | 3d4sA1 | 0.19 | 0.18 | 5.89 | 2.34 | MUSTER | | MSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMH----WYRATHQEAINCYAEE----TCCDFFTQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKR--QLLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCL- |
5 | 4ww3A | 0.18 | 0.17 | 5.61 | 1.80 | CNFpred | | IGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEG----VLCNCSFDYISR----DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSN-AGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWV |
6 | 5zbhA | 0.15 | 0.15 | 4.94 | 0.82 | HHsearch-2 | | YGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWR--PNNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPFQAYKDKYVCFDQFPS-----DSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNISSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFC |
7 | 5zbhA1 | 0.15 | 0.15 | 5.05 | 2.39 | Neff-PPAS | | YGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWR--PNNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPFQNVTLDAYKDKYVCFDQFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKY--RSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFC |
8 | 5zbhA | 0.15 | 0.15 | 4.94 | 1.33 | HHsearch | | YGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWR--PNNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPFQAYKDKYVCFDQFPS-----DSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNISSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNF- |
9 | 5zbhA1 | 0.15 | 0.15 | 5.05 | 2.40 | PROSPECTOR2 | | YGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWR--PNNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPFQNVTLDAYKDKYVCFDQFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRL--KYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFD |
10 | 3emlA | 0.19 | 0.18 | 5.90 | 3.49 | SAM | | ELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLF--------EDVVPMNYMVYFNFACVLVPLLLMLGVYLRIFLAARRQLNIFKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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