Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | AGQCLDWKTSSDGTVSDFQTVDCAKSHRFEVSHRENLATYPASEFGSNAGMPSRKRQAELSNELCKQPTLSYLGGKFDPTGRFTIAPILPPQKSWADGDRTLLCGLQVTGNDGHASTITGKAADQDQSPVFKPGECVAVTEKKDDNQNKQTDGDTSVDATAQVVDCNADHQYEVTDIVDLGEKFKEYPSTEDQNEYLNKRCTDSVTAFIGGDDKLYNSTLEPFWTTLTEDSWKGGSRNVNC |
1 | 5f1mA | 0.06 | 0.05 | 2.30 | 0.75 | SPARKS-K | | ---IEGRHMELGTMLEHRDKFYNQTNQQLLVLCDGGGHKAGEKSRFEAENLIEQHQAENWLRNNIKDINFQLYHYEYKGMGTTCVCALVFE-------KSVVIANVYVINSRQIEQITSDHSFVNHLVLTGQ------ITPEEAFTHPQRNITDKRVSPDLFIKRLN-FYDYLLLNLTD-------YVKDNEIKRLLVEDHGDQLMQLALDNH--SKDNVTFILAAIEG------------ |
2 | 6imjA | 0.10 | 0.09 | 3.26 | 0.48 | FFAS-3D | | SGKKASWQHNTIIPITDEFSTDVKDAVAEIFTKFFVEEGAVRISEGKNLGKKNATTVVHQAFKDALSKYNRHARQKRRGIPPLVKYFNIIPKTFFEEETDPIRAVACQ-QGDGCILLYSRTEKEFLGLDLFIDVRVYLLHRKPLQWIAGQANAKTD----------SSELHFYVFDCFWS----DQLQPSNKRQQLLTNIFKDEALRLK---AQFIKEGYEGAIVRNANGPYEPGYN---- |
3 | 5ue8A | 0.13 | 0.10 | 3.48 | 0.35 | HHpred | | --------------QALIYPISCTTPHNFEVWTA---TT-PTYGLLWGQDLLNADCLQRAAMERNKPEIFELIAVTLKWSAKISITVV--CAQGLQAGSSDPYVTVQVGKTK----KRTKTIYGNL---NPVWEENFHFECH---NSSDRDESDD-F-LGQTIIEVRTLS-GEMDVWYEIKGEEKVAP--YHV----QYTCLNLFHFVTDVQNN--G-VVKI-PDAKGDDAWKV------- |
4 | 6d4hA1 | 0.14 | 0.14 | 4.68 | 0.75 | MUSTER | | YMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMD-CLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVS---AHALQTMFQLKGYEYVSHINWNEDKAAAILEAWQRTYVEVV-HQSVAQNSTQKVLSFTTTDDILKSFSDVSVI |
5 | 3pnnA | 0.12 | 0.07 | 2.51 | 0.87 | CNFpred | | ---------------------------PFAVINADDF--------------YGRNGFEVLARKLMTL-----------KQGEYCMVGYRVGNTLSE--SGGVSRGVCQVDEKHLLTGVVERT-----GIERTDGTISFRDE-----------------GKICTLAE---DAPVSMNMWGFT---------PDYFDYSEELFINFLNAHGQEP------KSEFFIPFVVNDLIRSGRASVEV |
6 | 1ehsA | 0.15 | 0.03 | 0.98 | 0.39 | HHsearch-2 | | ---------------------------------------------------------------------------------------------------------------------STQS---------------------------------------------------------------NKKDLCEHYRQIAKESCKKG---FLGVRDGT----AG-ACFGAQIMVAAKGC----- |
7 | 4dgkA2 | 0.08 | 0.07 | 2.94 | 0.84 | Neff-PPAS | | QGFTFDAGPTVITDPSAIEELEYVELLPVTPFYRLCWESGKVFNYGVWFPRGGTGALVQGMIKLFQDLGGEVVLNHMETTGNKIEAVHL-------EDGRRFLTQAVASNADSNSLFVLYFGLNHHHDQL--AHHTVCFGPRLAEDFSLYLHAPCVTDSSLAP-----EGCGSYYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQHYMP----GLRSQLVTHRMFTPFDFRTITNLYLV |
8 | 2mxeA | 0.17 | 0.03 | 1.09 | 0.43 | HHsearch | | -----------------ARKVKYKNPHTGEVIET---KG------G------NHKTLKEWKAKWGPEAVESWATLLGH------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 6etxG | 0.08 | 0.07 | 2.98 | 0.62 | SP3 | | SPFAPDYIQRSLFHRKGINEESCF--------SFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLI |
10 | 1ur0A | 0.08 | 0.07 | 2.98 | 0.76 | PROSPECTOR2 | | SGVAFYNESGKKQDDANGNGYGGGNNDLMKLLADFHYSDFWADPAKQKAPNLNFEDKKTALYQYTKQSLKAMKAAGIDTNGGLAGE---TDWAKMSQSNILVALHFTNPETSGRYAWIAETLHRHHVDYPFWHGTYTYTAEDGDGHGNTAPKNGQTLNNPVTVIQAVSDVGEAGIGVFYWEPAWIPVGPAHRLEKNKALWETYGSGWATSYAAEYDPEDAGKWFGGSAQYVDTGTP----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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