Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | WGAIAIAPSGGWGFSSNMSSKQAAEKDAVERCSQFNTGCEVRISFNTCAVYATAPDGSYGWATNTTVDLARNNAVSECHKYTNDLCSSFIELC |
1 | 1wn9A | 0.05 | 0.04 | 2.00 | 0.84 | SPARKS-K | | -------------VRVGRAAPRVSLEALKAALGGLKSEAKVYLITDRYALLLHTGKKDLLVPDAPGGEEALSELVGLLLAQGAR--RFYEAVV |
2 | 1jtkA | 0.12 | 0.10 | 3.42 | 0.55 | FFAS-3D | | -GAALLTKDGKVYRGCNIENAAYAERTALFKAVSEGDTEFQML------AVAADTPGPV---------SPCGACRQVISELCTKDVIVVLT-- |
3 | 4p9cA | 0.14 | 0.13 | 4.38 | 0.23 | HHpred | | VGAIVVKNGSILAHGWNGTPSLHAEQNALVKMAKSSDGSELFCTHPDCSKIAQAGVKKVYYRNEYRIT----DGIDVLQQLG-V--EVEK--- |
4 | 3mduA | 0.07 | 0.06 | 2.69 | 0.74 | MUSTER | | FHYVHHDLDGR-----SYADPAELSLRISRAASAAGIGLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGHSLGLCFH |
5 | 4d8vA | 0.08 | 0.08 | 2.97 | 0.67 | CNFpred | | YGFTGTYKGKKISVQGTGMGVPSISIYVNELIQSY--DVQNLIRVGSCGAIRKDKVRDVILAMTS-DFELLKNAYDAAKDK---GVPVTVGSV |
6 | 4p9cA | 0.14 | 0.13 | 4.39 | 0.53 | HHsearch-2 | | VGAIVVKNGSILAHGWNGTPVLHAEQNALVKMAKSSDGSELFCTHPDCSKIAQAGVKKVYYRNEYRI----TDGIDVLQQL-GVEVEKM---- |
7 | 1o0wB2 | 0.10 | 0.06 | 2.42 | 0.74 | Neff-PPAS | | ---------------------FDYKTALQEIVQSEHKVPPEYILVRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKLLK--------- |
8 | 4kzsA1 | 0.10 | 0.04 | 1.58 | 0.58 | HHsearch | | -----------------------------------------------------QKGYLYGSGSATSKEASKQKALADLVASISVVVEIVNQE- |
9 | 5awoA1 | 0.11 | 0.10 | 3.51 | 0.74 | SP3 | | -----IGGNQLYWLDVTKSGAKEYVQGYVRYFKDLGVP---YLRIDFLSWYEDGRDANIGQVNAPHGRANYELALSWINEAAGED--MEVSLV |
10 | 4ndsA | 0.15 | 0.13 | 4.32 | 0.42 | PROSPECTOR2 | | W-------KANSCPGSAFESKDRLRSFALLYCRYNYKPPYGQGAFGYASAVSTHGWE--------TEAQTFEQIITSCHGQSNNSGRLSLAFG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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