>PF13810 (307 residues) SINETAASYQVHGTDLGIIWDNGAGEVLMAFGDTYGEGWGGNGAGPREADWRCNVLARSS DTDLADGMTFDTMVQDRPGHAKQLLDCKQVNNDEETVIPTAGVTVHGRSYIHYMSVNHWG PPGQWFTNHSGIAYSDDNGETWTKDPDAVWTNTPEWSNKFQLAAFARHGGHVYMFGTPNG RFGDAHLARVPASRVLDKEAYRYWDGSGWSRDEAAAAPVATGPVGELSVQYNGYAGRWLM TYLDESRAAIVLRDAPRPTGPWSEEQVIVSGTEYPALYGGFMHPWSSGPDLYFAMTQWAP YNVTLMR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SINETAASYQVHGTDLGIIWDNGAGEVLMAFGDTYGEGWGGNGAGPREADWRCNVLARSSDTDLADGMTFDTMVQDRPGHAKQLLDCKQVNNDEETVIPTAGVTVHGRSYIHYMSVNHWGPPGQWFTNHSGIAYSDDNGETWTKDPDAVWTNTPEWSNKFQLAAFARHGGHVYMFGTPNGRFGDAHLARVPASRVLDKEAYRYWDGSGWSRDEAAAAPVATGPVGELSVQYNGYAGRWLMTYLDESRAAIVLRDAPRPTGPWSEEQVIVSGTEYPALYGGFMHPWSSGPDLYFAMTQWAPYNVTLMR | |||||||||||||||||||
1 | 4hbsA | 0.13 | 0.12 | 4.28 | 1.70 | SPARKS-K | YNALFTRSLGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENR-SRGNCSFPRNSI-VQTPGEKDENLVWDYVQTNDPYQVRTHIRHPKATLQDYLYWAGDATIYNNQQLW---GAVDNTDPNNLRRFGTCLATYSLEGKTYKLISRNDNFNDHT--LGYGDT-WEDEDGHIYLYTTSN---YKVAVARTATRDLGS--QWEYYVADSWTTQYPSSTIIPLESACSPWVFKKG--DTYY-IGQSWFGRDVL-FRSKHPYGPFVDQKTLFTLPEYQHVY-VNIHPASRTGELVISTNTDCSYRPYFYR | |||||||||||||
2 | 4hbsA | 0.12 | 0.11 | 3.92 | 1.54 | FFAS-3D | -----TRSLGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRGNCS-FPRNSIVQTPGEKDENLVWLADYVQTNDPNADRYYQVAGEIDQDYLYWAGDATIYNNQQLWGAVD---NTDPNNLRRFGTCLATYSLEGKPGDATYKLISRNDFNDHTLGYGDTWEDEDGHIYLYTTS---NYKVAVARTATRDLGSQ--WEYYVADPQGHFSWTTQYPSTQDAENSTIIVFKKGDTYYIG--QSWFGRDVLFRSKHPYGPFVDQKTLFTLPEFLQHVYVNIHPALSRTGEFYRVFNWESYD----- | |||||||||||||
3 | 4hbsA | 0.13 | 0.12 | 4.06 | 4.17 | HHpred | -----TRSLGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRG-NCSFPRNSI-VQTPGKDE---NLVWLARTHIRHPKATLSDEKEIDQDYLYWAGDATIYNN--QQLWGAVDNTDP-NNLRRFGTCLATYSLEGATYKLISRNDNFN--DHTLGYGD-TWEDEDGHIYLYTTSN---YKVAVARTATRDLG--SQWEYYVADSWTTQYPENSTIIESACS-PWVFKK--GDTYY-IGQSWFGRDV-LFRSKHPYGPFVDQKTLFTLPEFQHVY-VNIHPALRTGELVISTNTDCS------- | |||||||||||||
4 | 4hbsA | 0.14 | 0.14 | 4.65 | 1.36 | MUSTER | NRSGQYWKVGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRGNC-SFPRNSIVQTPGEKDENLVWLAYQVRTHIRHPKATLSQAGEIDQDYLYWAGDATIYNN--QQLWGAVDN-TDPNNLRRFGTCLATYSLEGKPATYKLISRNDNFNDHTLGYG-DTWEDEDGHIYLYTT---SNYKVAVARTATRDLGS--QWEYYVADSWTTQYPSNSTIIPLSACSPWVFKKG--DTYYIGQSWFGR--DVLFRSKHPYGPFVDQKTLFTLPEFLDKIGVNIHPASRTGELVISTNTDAPGSADFYR | |||||||||||||
5 | 4hbsA | 0.14 | 0.12 | 4.25 | 3.23 | CNFpred | ---------GWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRGN-CSFPRNSIMVQTPGEKDENLVWLADVRTHIRHPKATLSDEKIIDQDYLYWAGDATIYNNQMQMLWGAVDNTDPNNLMRRFGTCLATYSLEGTYMKLISRNDNFND--HTLGYGDTMWEDEDGHIYLYTTSN---YKVAVARTATRDL--GSQWEYYVADSWTTQYPS-STIIPSACSMPWVFKKG--DTYYMIGQSMFGRDVLMFRSKHPYGPFVDQKTLFTLPEYQHVYMVNIHPALSRGELVISTNTD--------- | |||||||||||||
6 | 4hbsA | 0.14 | 0.13 | 4.37 | 4.12 | HHsearch-2 | YNALFTRSLGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRG-NCSFPRNSI-VQTPGKDENLVWLADYVNDPIRHPKATLSDEGEIDQDYLYWAGDATIYNN--QQLWGAVDNTDP-NNLRRFGTCLATYSLEGATYKLISRNDNFN--DHTLGYGD-TWEDEDGHIYLYTTSN---YKVAVARTATRDLG--SQWEYYVADSWTTQYPENSTIIESACS-PWVFKK--GDTYY-IGQSWFGRDV-LFRSKHPYGPFVDQKTLFTLPEFQHVY-VNIHPALRTGELVISTNTDCNFSADFYR | |||||||||||||
7 | 4hbsA | 0.13 | 0.12 | 4.29 | 1.87 | Neff-PPAS | -----TRSLGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRGN-CSFPRNSIVQTPGEKDENLVWLADYVQTNDPNADRYYQVRTHIRQDYLYWAGDATIYNNQQLWGAVDN---TDPNNLRRFGTCLATYSLEGKPGDATYKLISRNDNFNDHTLGYDTWEDEDGHIYLYTTSN---YKVAVARTATRDLGSQ--WEYYVADSWTTQYPSTQDAENSTISACSPWVFKKGDTYYIGQS--WFGRDVLFRSKHPYGPFVDQKTLFTLPEFLDKIGVNIHPASRTGELVISTNTDCPGSADFYR | |||||||||||||
8 | 4hbsA | 0.13 | 0.12 | 4.28 | 5.86 | HHsearch | YNALFTRSLGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRG-NCSFPRNSI-VQTPGKDENLVWLADYVNDPIRHPKATLSDEGEIDQDYLYWAGDATIYNN--QQLWGAVDNTDP-NNLRRFGTCLATYSLEGATYKLISRNDNFN--DHTLGYGD-TWEDEDGHIYLYTTSN---YKVAVARTATRDLG--SQWEYYVADSWTTQYPENSTIIESACS-PWVFKK--GDTYY-IGQSWFGRDV-LFRSKHPYGPFVDQKTLFTLPEFQHVY-VNIHPALRTGELVISTNTDCSFSADFY- | |||||||||||||
9 | 4hbsA | 0.12 | 0.11 | 4.04 | 1.49 | PROSPECTOR2 | NSEVKTRSLGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINETPGEKDENLVWLADYVQTNDPNADRYYQVRTHIRHPKATLSDEKIQAGEIDQDYLYWAGDATIYNNQQLWGAVD---NTDPNNLRRFGTCLATYSLEGKPGDATYKLISRNDNDHTLGYGD-TWEDEDGHIYLYTT---SNYKVAVARTATRDLGS--QWEYYVADPWTTQAENSTIIPLESACSPWVFKKG--DTYY-IGQSWFGRDV-LFRSKHPYGPFVDQKTLFTLPEFLDKIGVNIHPASRTGELVISTNTDCSYRVFNWE | |||||||||||||
10 | 4hbsA | 0.14 | 0.12 | 4.22 | 2.71 | SAM | ---------GWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRG-NCSFPRNSI-VQTPGKDENLVWLADYVQTDPRHPKATLSDEGEIDQDYLYWAGDATIYNN--QQLWGAVDNTDP-NNLRRFGTCLATYSLEDATYKLISRNDNFN--DHTLGYGDT-WEDEDGHIYLYTTSN---YKVAVARTATRDLG--SQWEYYVADSWTTQYPENSTIIESACS-PWVFKK--GDTYY-IGQSWFGRDV-LFRSKHPYGPFVDQKTLFTLPEFQHVY-VNIHPALSTGELVISTNTD--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |