Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | VEFYKEQVQPALESKLEEFKLMGYDRVSLEEIWDCLQKKKWKKKTDKSLHEIVSDILTLKINDYMSYLTIEAYKAPDFFAQ |
1 | 3ox5A1 | 0.12 | 0.11 | 3.91 | 1.00 | SPARKS-K | | DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEMELIELSQQINMVDFDDFVELMGPKLLAE------ |
2 | 2kaxA | 0.17 | 0.16 | 5.27 | 0.67 | FFAS-3D | | -----TPLEKALTTMVTTFHKYSGRELSRKELKELIKKELCGEMKESSIDDLMKSLDEIDFKEYSVFLTMLCMAYNDFFLE |
3 | 3v53A | 0.15 | 0.11 | 3.77 | 0.37 | HHpred | | -ILMERRIRPWINKKIIEY--IG------ATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRL---------- |
4 | 1cfpA | 0.09 | 0.09 | 3.27 | 0.92 | MUSTER | | LEKAVVALIDVFHQYSGR---KHK--LKKSELKELINNELSHFLEEIKEQEVVDKVMETDFQEFMAFVAMITTACHEFFEH |
5 | 2btvA | 0.09 | 0.09 | 3.27 | 0.49 | CNFpred | | IESVYASELSVMKVDMRHLSLMQLIQARPSHFWKAVLNDS-----PEAVKAVMNLSHFINIRDMMRWVLLPSLQPSLKLVL |
6 | 1vt4I3 | 0.21 | 0.21 | 6.65 | 0.49 | HHsearch-2 | | DQYFYSHIGHHLKNHPERMTLFRMVGSILNTLQQLKFYKPYICDNDPKYERLVNAILDLICSKYTDLLRI-ALMAEDIFEE |
7 | 3ox5A1 | 0.12 | 0.11 | 3.90 | 0.85 | Neff-PPAS | | -RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEMELIELSQQINMVDFDDFVELMGPKLLAE------ |
8 | 3v53A | 0.14 | 0.12 | 4.22 | 0.53 | HHsearch | | SILMERRIRPWINKKIIEY--IG------ATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRYETEAKKIGL- |
9 | 1ksoA | 0.10 | 0.10 | 3.64 | 0.97 | SP3 | | LEQAVAAIVCTFQEYAGRCGDKYK--LCQAELKELLQKELATWTPTEFRECDYNKFMSVDFVEYVRSLACLCLYCHEYFKD |
10 | 1ksoA | 0.13 | 0.12 | 4.28 | 0.47 | PROSPECTOR2 | | ARPLEQAVAAI----VCTFQEYDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVDFVEYVRSLALCLYCHEYFKDC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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