Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | QMFKGIPMQVKLTNGEAEKRAGLPERFTEAISKAQKPDDNVVMERKWVEQGVRYGELDEVAKEVAEELSAAFTKDRLTELV |
1 | 5cwnA1 | 0.20 | 0.20 | 6.33 | 0.80 | SPARKS-K | | PEEILERAKESLERAREASERGDEEEFRKAAEKALELAKRLVEQAKKEGDPELVLEAAKVALRVAELAAKNGDKEVFKKAA |
2 | 2os5A | 0.15 | 0.14 | 4.54 | 0.49 | FFAS-3D | | ------PVRVATNLPDKDVPANFEERLTDLLAESMNKPRNRIAIEVLAGQRITHGDNIRHTQKITQFCQDTLPKDKV---- |
3 | 2dvzA2 | 0.18 | 0.15 | 4.80 | 0.24 | HHpred | | -VWYG----LLAPKGT---P-DVVNKLRDAAVVAL-KDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDW------AQDVV |
4 | 2xtlA2 | 0.14 | 0.11 | 3.78 | 0.82 | MUSTER | | -----------------RKSGVATDAEKAAVDSTKSALDAAVKAYNDLTKEKQEGQDGKSALATVSEKQKAY-NDAFVKAN |
5 | 5igaA | 0.13 | 0.10 | 3.43 | 0.45 | CNFpred | | ------PFLFLMNKA---KYESLSDEHKKVIDNNA--GLALAKLAGQ--------LWDGFEVPARKLALDALSGGPLAEMK |
6 | 7r1rA | 0.10 | 0.07 | 2.77 | 0.26 | HHsearch-2 | | ---MNQNLLVTKRDGS--TERINLDKIHRVLDWAAEGLHN--------------VSISQVELRSHIQFYDGIKTSDIHETI |
7 | 5cwnA1 | 0.21 | 0.20 | 6.26 | 0.68 | Neff-PPAS | | ------RAKESLERAREASERGDEEEFRKAAEKALELAKRLVEQAKKEGDPELVLEAAKVALRVAELAAKNGDKEVFKKAA |
8 | 4gqzA | 0.13 | 0.11 | 3.84 | 0.54 | HHsearch | | DQTPITSTELKLSDGEQIYTLPLGDKFYLSFAP-------YEW----RTHPCFNGEPNKPGAVIVQKE-QSYRNGFIGPL- |
9 | 3u1kA2 | 0.12 | 0.09 | 3.07 | 0.85 | SP3 | | ---------------------TPSPEIVKYTHKLAMERLYAVFTDYEHDKVSRDEAVNKIRLDTEEQLKEKFPPYEIIESF |
10 | 2mraA | 0.17 | 0.17 | 5.67 | 0.42 | PROSPECTOR2 | | MAGKELRVEIKIDCGNDDLYFSKAEEAKELLKKVAEKAADKIKKQKRVKIRFEKKGLDDDARKKAKKWALEVANKIANELH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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