Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | LHPELRRRFSVGLASGELCVGRGVMDRIWHGRAFVKPFLALGGLRNILLPRTGRDVPFTIENVPYLDSYGRETVTFVRTFDLPGGPRRFDATMVHSPERDCVLDYLGTHQHLASDLHPTVEPDGSLLITSGEHRFREGPVDVRVPELLAGRAEVRESFDERTGRFRIDVRVVNRHFGPLFGYQGSF |
1 | 6n2bA1 | 0.14 | 0.12 | 4.24 | 0.83 | SPARKS-K | | LPNYKFTVRGGSIYSGERIQTQGEFKAIGVNN--------LICKGPEVIVNGG-GNSIEIKEIMYIQN------KLVFNGAPNTNPNTLNANKIYTGLG--GMELNGYGYEIYSDGEVQVKNYGNFEIGSIGIVKKLTNGRTTIKSG--ATLYCDQLEVRNNGRVFITLVTRAISISGGTIEGPGT |
2 | 2fr2A | 0.12 | 0.10 | 3.59 | 0.67 | FFAS-3D | | LAPALQALSPL------LGSWAGRGAG---------------------KYPTIRPFEYLEEVVFAHVGKPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGVIELELST----RADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVGQPLQDHLAAVL |
3 | 2c9iA | 0.14 | 0.12 | 4.02 | 0.28 | HHpred | | ----------GKPY---EGTQSLNITITEGGPPFAFDILSHA-FIKVFAKYP-KEIPDFF-KQS--LP---GGFSWERVSTYEDGVLSATQETSLQ--GDCIICKVGPVQKKTCGWEPSTERDGLLLRDTP--ALMLDGGEVKLPEFHHLRMEKLNIS-DDWKTVEQHVVASYSQVPSK------- |
4 | 5n8oA | 0.14 | 0.13 | 4.40 | 0.72 | MUSTER | | RYARLAGDFAASVKAGEESVAQVSGVREQ--AILTQAIRSELKTQGVL---GHPEVTMTALSPVWLDSRSRYLRDMVMEQWNPTRSHDRYVIDRVTAQSHSLTLR-GETQVVRIS-SWSLFRPEKMPVADGERLRVTGKIP---GLRVSGGDRLQVASVSED-----AMTVVVPGRAEPASLPVSD |
5 | 3wiqA | 0.11 | 0.09 | 3.32 | 1.03 | CNFpred | | ------------------ALTNGYIGIRGINEEVFCEETPGTYIAGVFDKSTLVNLPNPIGLRIYINR-KCEILEFKRVLDLK--QGILYRKLRLKDITTIEGFRFVSKNLIVQKYDVVCENSAVLNVES----FIDATTVNSKD-DRVKHYEIDKKKDF-ADGIYLGITTKD-KVGIASSTKVLL |
6 | 4n0rA | 0.12 | 0.08 | 2.86 | 0.47 | HHsearch-2 | | SSTATCFILNGLLG-GIYVT-HGECYPIFESWKRVKFLRTIIEAAPHLEADISRDL-VT---STA---GP--DYY---LV-NGKDVGFWTFNLPVDKNKRFKVEIIDVW---------------A-TVTEYPVIFETHHRGVRIPDA-PYIVLRITEVK--------------------------- |
7 | 6n2bA1 | 0.08 | 0.08 | 3.16 | 0.85 | Neff-PPAS | | -GERIQTQGEFKAIGVNNLICKGPEVIVNGGGNSIEIKEIMYIQNKLVFNGAPNTNPNTLNANKIYTGLG--GMELNGYGYYKANEIYSDGEVQVKNYGNFEIGSIGIVKKLTVTDNGRTTIKSGATLYCDQLEVRN-NGRVFIATLVTRAISISGGTIEGPGTRQVNPSATFPSYPPFIDDIKNF |
8 | 3ebgA5 | 0.11 | 0.02 | 0.78 | 0.39 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------TPHVSFKYNYDAEKKQYSIHVNQYTKPDNQIINPEGK- |
9 | 1h9jA | 0.12 | 0.09 | 3.06 | 0.95 | SP3 | | ---------GSHMKISARNVFKGTVSALKEGAVNAEVDILL---------GGGDKLAAVVTLESARSAAGKEVVAVVKLLMTDSSGYRLSARNIL---TGTVKTIE--TGAVNAEVTLALQGGTEITSMVTKEAVAELG--------LKPGASASAVIKAS------NVILGVPA----------- |
10 | 4u48A4 | 0.11 | 0.10 | 3.66 | 0.67 | PROSPECTOR2 | | VAALPGFQFGNIAEENLSRSLDGRGEVS------------------AASQWQEAHSPLQVILQASLLESGGRPVTRRVEQAIWPADTLPGAKAVYDYRTDTTVNQPIVDEDSNAAFDIYANAQGELQVRLIRERRDYYWNWSESEGWQSQFDQKDLVEGEEWGAYRLEVKAPNETVSSVRFWAGYS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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