>PF13701 (414 residues) QLSFDGGHLTQYGGLIFFQELFSQLKLKERISKYLATNDQRRYCRYSDSDILVQFLFQLL TGYGTDYACKELSADAYFPKLLEGGQLASQPTLSRFLSRTDEETVHSLRCLNLELVEFFL QFHQLNQLIVDIDSTHFTTYGKQEGVAYNAHYRAHGYHPLYAFEGKTGYCFNAQLRPGNR YCSEEADSFITPVLERFNQLLFRMDSGFATPKLYDLIEKTGQYYLIKLKKNTVLSRLGDL SLPCPQDEDLTILPHSAYSETLYQAGSWSHKRRVCQFSERKEGNLFYDVISLVTNMTSGT SQDQFQLYRGRGQAENFIKEMKEGFFGDKTDSSTLIKNEVRMMMSCIAYNLYLFLKHLAG GDFQTLTIKRFRHLFLHVVGKCVRTGRKQLLKLSSLYAYSELFSALYSRIRKVN |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QLSFDGGHLTQYGGLIFFQELFSQLKLKERISKYLATNDQRRYCRYSDSDILVQFLFQLLTGYGTDYACKELSADAYFPKLLEGGQLASQPTLSRFLSRTDEETVHSLRCLNLELVEFFLQFHQLNQLIVDIDSTHFTTYGKQEGVAYNAHYRAHGYHPLYAFEGKTGYCFNAQLRPGNRYCSEEADSFITPVLERFNQLLFRMDSGFATPKLYDLIEKTGQYYLIKLKKNTVLSRLGDLSLPCPQDEDLTILPHSAYSETLYQAGSWSHKRRVCQFSERKEGNLFYDVISLVTNMTSGTSQDQFQLYRGRGQAENFIKEMKEGFFGDKTDSSTLIKNEVRMMMSCIAYNLYLFLKHLAGGDFQTLTIKRFRHLFLHVVGKCVRTGRKQLLKLSSLYAYSELFSALYSRIRKVN | |||||||||||||||||||
1 | 3ecpA | 0.11 | 0.10 | 3.54 | 1.29 | SPARKS-K | --------------------TSALHRAADWAKSVFS------SAALGRTARLVNVAAQLAKYSG-----------KSITISSEGSK-AAQEGAYRFIRNVS------AEAIRKAGAMQTVKLAEFPELLAIEDTTSLSYRHQVEELGKLGSDKSRGVHSVLLLEATTFRTVHQEWWMRPDDESGKWLAAAATSRLRMGNVIAVCDREADIHAYLQDKLAHNERFVVRSKSGLYLYDHLKNQPELKNRPARKASLSLRSGRITLKQGNI-TLNAVLAEEIPPKGETPLK-WLLLTSEPVESALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTPSEKAGSLQWAYMAIARLGGFMDSKRT--------GIASWGALWEGWEALQSKL | |||||||||||||
2 | 3ecpA | 0.11 | 0.10 | 3.56 | 1.97 | FFAS-3D | ------SALHR------AADWAK-----SVFSSALGDPR--------RTARLVNVAAQLAKYSGK--SITISSEGS----------KAAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLA---QEFPELLAIEDTTSLSYRHQVAEELGSIQDKSRGWHSVLLLEATTFRTVGLLHQDADEKESGKWLAAAATSRLRMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRYLYDHLKNQPELKRKNRPARKASLSLRSGRITLKQGNITLNAVLAEEIPPKGETPLKWLLLTSEPVESALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTPSLTPDECQLLLQWAYMAIARLGGFDSK-----RTGIASWGALWEGWEALQSK- | |||||||||||||
3 | 3ecpA | 0.14 | 0.12 | 4.05 | 1.93 | HHpred | ------------------------HRAASVFSSALGDPR--------RTARLVNVAAQLAKYSGK-----------SITISSEG-SKAAQEGAYRFIRNPNVS-AEAI---RKAGAMQTVKLAQFPELLAIEDTTSLSYRHQAEELGKLGSIKSRGWHSVLLLEATTFRTVGQEWWMRPDKESGKWLAAAATSRLRMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVELYDHLKNQPGGYQISNRPARKSLSLRSGLKQGNITLNAVLAEEINKGE-TPLKWLLLTSEPVAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTPAETVLTCQLLGYLDKG---------KR---KRKEKAGSLQWAYMAIARLGGF- | |||||||||||||
4 | 3ecpA | 0.13 | 0.11 | 3.97 | 1.03 | MUSTER | -------TSALHRAADWAKSVFSSAA--------LGDPR--------RTARLVNVAAQLAKYSGK------------ITISSEGSK-AAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQE---FPELLAIEDTTSLSYRHQVAGKLGSIQDKSRGWHSVLLLEATTFRLLHQEWWMRPDDPADAWLAAAATSRLRMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPELGGYSLSLRSGRITLKQGNITLNAVLAEEIPPKGETPLKWLLLTSEPVESALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTETVTPDECQLLGYLDLQWAYMAI--DSKGALWWEALQSKLDGFLAAKDLMAQIK | |||||||||||||
5 | 1murA | 0.12 | 0.11 | 3.74 | 1.53 | CNFpred | ---------------DWAKSVFSSAALGDP----------------RRTARLVNVAAQLAKYSG-----------KSITISSEGS--AAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQEF---PELLAIEDTTSLSYRHQAEELGKLGQKASRGWWVHSVLLLETFRTVGLLHQEWW-KESGKWLAAAATSRLRM-NVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRYLYDHLKNQPELGGYQIRKASLSLRSGRITLKQG--NITLNAVLAEEINP--ETPLKWLLLTSEPVAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEKPDNLERMVSILSFVAVRLLQLRESFT-VLTPDECQLLGYLSLQWAYMAIARLGGFMDSKRTGIASWGALWEGWEALQSKL | |||||||||||||
6 | 3ecpA | 0.12 | 0.11 | 3.81 | 3.30 | HHsearch-2 | --------------------TSALHRAADWAKSVLGDPR--------RTARLVNVAAQLAKYSGK-----------SITISSEG-SKAAQEGAYRFIRNPNVSA-EAI---RKAGAMQTVKLAQFPELLAIEDTTSLSYRHQAEELGKLGSIKSRGWHSVLLLEATTFRTVGQEWWMRPDKESGKWLAAAATSRLRMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVELYDHLKNQPGGYQISNRPARKSLSLRSGLKQGNITLNAVLAEEINKGE-TPLKWLLLTSEPVAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTPAETVGSLQWAYMAIARLGGFMDSKR--------TGIASWGALWEGWEALQSKL | |||||||||||||
7 | 3ecpA | 0.11 | 0.09 | 3.32 | 1.38 | Neff-PPAS | -------TSALHRAADWAKSVFSSAALGD----------------PRRTARLVNVAAQLAKYS-----------GKSITISSEGSK-AAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQE---FPELLAIEDTTSLSYRHQVAEELGKLGSIQDWVHSVLLLEATTFRTVGLLHQEESGKWLAAAATSRLRMGSMMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHGLYLYDHLKNQPELKRKNRPARKASLSLRSGRITLKQGNITLNAVLAEEINPPGETPLKWLLLTSEPLAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTPSQS-----------------------------AETVLTPDECQLLGYLDKGKR | |||||||||||||
8 | 3ecpA | 0.13 | 0.11 | 3.86 | 4.33 | HHsearch | --------------------TSALHRAADWAKSVLGDPR--------RTARLVNVAAQLAKYSGK-----------SITISSEG-SKAAQEGAYRFIRNPNVSA-EAI---RKAGAMQTVKLAQEPELLAIEDTTSLSYRHQAEELGKLGSIKSRGWWVVLLLEATTFRTVGQEWWMRPDKESGKWLAAAATSRLRMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVELYDHLKNQPEGYQISNRPARKSLSLRSGLKQGNITLNAVLAEEINKGET-PLKWLLLTSEPVAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTPAETVLECQLLGYL--DKG-------K---RKRKEKAGSLQWAYMAIARLGSK- | |||||||||||||
9 | 1muha | 0.13 | 0.11 | 3.95 | 1.40 | PROSPECTOR2 | A---------LHRAADWAKSVFSSAALGDP----------------RRTARLVNVAAQLAKYSGK-----------SITISSEGSK-AAQEGAYRFIRNPNVSAEAIRKAGAMQTVKLA---QEFPELLAIEDTTSLSYRHQVEELGKLGSIQDKSRHSVLLLEATTFRTLHQEWWMRPDDPADAAATSRLRMGSMMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPELGGYQISIPQKGVVDKRGKRKNRVLAEEINPPKGETPLKWLLLTSEPVESALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTPQSAETVLTPDECQLLG---YLDKGKRK-----RKEKAGFLAAKDLMAQGIKIG | |||||||||||||
10 | 3ecpA | 0.13 | 0.09 | 3.19 | 1.96 | SAM | ----------------------------------LGDPR--------RTARLVNVAAQLAKYSGKS-----------ITISS--ESKAAQEGAYRFIRNPNVS----AEAIRKAGAMQTVKLAQEFPELLAIDTTSLSYRH-QEELGKLIKSRGWWVHSVLLLEATTFRTVGQEWWMRPEKESGKWLAAAATSRLRMGNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPEPQKGARRSGRITLK--QGNITLNAVLAEEIPPKGETPLKWLLLTSEPLAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRES-------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |