Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LFIASIGLHMLRIYFTGAFRKPRELNWVIGFILFILAMGEGFTGYSLPDDLLSGNGLRIIDGLIKGIPVVGTWISYLLFGGEFPGDQVIGRFYTLHILLLPAIIVALIALHLVFVVVHKHTQYPGPGKTNDNVVGYPILPVYAAKAGGFFFIVFGVIALMAAFFTINPIWNYGP |
1 | 6hwhb | 0.56 | 0.56 | 16.21 | 3.13 | SPARKS-K | | MFAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGIRAALSGTMGIPVIGTWMHWALFGGDFPGEILIPRLYALHILLIPGIILALIGAHLALVWFQKHTQFPGPGRTETNVVGVRVMPVFAVKSGAFFAMITGVLGLMGGSAGSQPDFYMMW |
2 | 2ibzC1 | 0.29 | 0.27 | 8.21 | 2.62 | FFAS-3D | | -FFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFTLTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALH-YLVPFIIAAMVIMHLMALHIHGSS---NPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSP--------- |
3 | 1zrtC | 0.30 | 0.30 | 9.06 | 3.95 | HHpred | | LFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNATLNRFFSLHY-LLPFVIAALVAIHIWAFHTTGNNNPTGVEVADAEKDTLPFWPYFVIKDLFALALVLLGFFAVVAYAHIVPEWYFLP |
4 | 6hwhb | 0.61 | 0.61 | 17.60 | 3.23 | MUSTER | | MFAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGIRAALSGIMGIPVIGTWMHWALFGGDFPGEILIPRLYALHILLIPGIILALIGAHLALVWFQKHTQFPGPGRTETNVVGVRVMPVFAVKSGAFFAMITGVLGLMGGLLTINPIWNLGP |
5 | 5kkzA | 0.29 | 0.29 | 8.75 | 1.48 | CNFpred | | LFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHY-LLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMP-GHPDNYIE |
6 | 1zrtC | 0.29 | 0.29 | 8.91 | 2.64 | HHsearch-2 | | LFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNATLNRFFSLHYL-LPFVIAALVAIHIWAFHTTGNNNPTGVEVADAEKDTLPFWPYFVIKDLFALALVLLGFFAVVTPAHIVPEWYFLP |
7 | 2ibzC1 | 0.29 | 0.29 | 8.74 | 3.03 | Neff-PPAS | | FFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFTLTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALH-YLVPFIIAAMVIMHLMALHIH---GSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNGHPDNYIP |
8 | 2ibzC | 0.30 | 0.29 | 8.73 | 4.04 | HHsearch | | FFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFTLTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYL-VPFIIAAMVIMHLMALHIHGSSNPLG---ITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVTPASIVPEWYLL- |
9 | 1zrtC1 | 0.29 | 0.28 | 8.58 | 1.87 | PROSPECTOR2 | | SGFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNATLNRFFSLHYL-LPFVIAALVAIHIWAFHTTGNNNPTGTSKADAEKDTLPFWPYFVIKDLFALALVLLGFFAVVA---YMPNYLGHP |
10 | 6hwhb | 0.62 | 0.61 | 17.60 | 2.51 | SAM | | -FAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGIRALSGITMGIPVIGTWMHWALFGGDFPGEILIPRLYALHILLIPGIILALIGAHLALVWFQKHTQFPGPGRTETNVVGVRVMPVFAVKSGAFFAMITGVLGLMGGLLTINPIWNLGP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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