Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LLIQADLTAVAPGPLVPRVAAELARMADIESAGAATVYRFTESSLRRALDAGSSAEDLHDLLGQLARGGVPQTLTYLIDDTARRHGRLRSGPAASYLRCDDTALLTEVVASRHTQALAMRRVA |
1 | 6nmiD | 0.16 | 0.16 | 5.38 | 1.38 | SPARKS-K | | IVVETNYRLYAYTE-SELQIALIALFSEMLYRPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRATPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFENS |
2 | 6nmiD | 0.17 | 0.16 | 5.37 | 1.43 | FFAS-3D | | IVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRATPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHSDVKRFWKRQ-- |
3 | 6nmiD | 0.16 | 0.15 | 5.14 | 1.94 | HHpred | | IVVETNYRLYAYTESELQIA-LIALFSEMLYRPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRA-HPLPPTITDQIRLWELERDRLRFTEG-VLYNFLSQVDFELLLAHARELGVLVENS- |
4 | 6nmiD | 0.16 | 0.16 | 5.38 | 1.39 | MUSTER | | IVVETNYRLYAYTE-SELQIALIALFSEMLYRPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRATPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFENS |
5 | 5dm0A | 0.11 | 0.11 | 3.83 | 0.53 | CNFpred | | --VSKKQDIIFIHLCFKNPIAIVNTLIHLLSDSCIYIVDLDRNSLGEGLNT-AQSREEEAYLKDQYRASTMEEFKQLLHVVTKEQHGVSFHVGNSFIGGFDSSQFFSLMRNRNLQDALRTSVG |
6 | 6nmiD | 0.17 | 0.17 | 5.59 | 2.59 | HHsearch-2 | | IVVETNYRLYAYTESELQIA-LIALFSEMLYRPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRA-HPLPPTITDQIRLWELERDRLRFTEG-VLYNFLSQVDFELLLAHARLGVLVFENSA |
7 | 6nmiD | 0.16 | 0.16 | 5.38 | 0.62 | Neff-PPAS | | IVVETNYRLYAYTE-SELQIALIALFSEMLYRFNMVVAQVTRESVQQAIASGITAQQIIHFLRTRATPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFENS |
8 | 6nmiD | 0.16 | 0.15 | 5.14 | 4.49 | HHsearch | | IVVETNYRLYAYTESELQIA-LIALFSEMLYRPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRA-HPLPPTITDQIRLWELERDRLRFTEG-VLYNFLSQVDFELLLAHARELGVVFENS- |
9 | 1e5da1 | 0.09 | 0.09 | 3.39 | 0.49 | PROSPECTOR2 | | ---PTNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMHHSQIMSEISDNGILPYVAGTLQYIKGLRPSGESTKVLAEWLTGMGFDMPATPVKVKNVPTHADYEQLKTQTIARALKAKLAA |
10 | 6nmiD | 0.17 | 0.16 | 5.34 | 1.38 | SAM | | IVVETNYRLYAYTESELQIA-LIALFSEMLYRPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRA-HPLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLV---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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