Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | QVLDVVHLADSLYKPLGIHLVVVGLEIWSQKNLIAIAKSIDELLDTFNTWRKTILVQHLRHDVGHLFVYKHFGIKFGLSFVGSVCDPNWASAVEAFITSSLFSFTITFAHQLGHNLGMQHD |
1 | 1dthA | 0.33 | 0.33 | 9.93 | 2.33 | SPARKS-K | | RVHEIVNFINGFYRSLNIHVSLTDLEIWSNEDQINIQSASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDETLGLAPLGTMCDPKLSIGIVQDHSPINLLMGVTMAHELGHNLGMEHD |
2 | 1dthA | 0.33 | 0.33 | 9.92 | 1.95 | FFAS-3D | | -VHEIVNFINGFYRSLNIHVSLTDLEIWSNEDQINIQSASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDETLGLAPLGTMCDPKLSIGIVQDHSPINLLMGVTMAHELGHNLGMEHD |
3 | 2erpA | 0.35 | 0.35 | 10.37 | 3.53 | HHpred | | RMYDIVNVITPIYHRMNIHVALVGLEIWSNTDKIIVQSSADVTLDLFAKWRATDLLSRKSHDNAQLLTGINFGPTAGLGYLGGICNTMYSAGIVQDHSKIHHLVAIAMAHEMGHNLGMDHD |
4 | 3k7nA | 0.31 | 0.31 | 9.48 | 2.64 | MUSTER | | KVYEMINAVNTKFRPLKIHIALIGLEIWSNKDKFEVKPAASVTLKSFGEWRETVLLPRKRNDNAQLLTGIDFNNTVGRAYIGSLCKTNESVAIVQDYNRRISLVASTITHELGHNLGIHHD |
5 | 3k7lA | 0.35 | 0.35 | 10.37 | 2.12 | CNFpred | | KVYEMINTMNMIYRRLNFHIALIGLEIWSNINEINVQSDVRATLNLFGEWREKKLLPRKRNDNAQLLTGIDFNTPVGLAYIGSICNPKTSAAVVQDYSSRTRMVAITMAHEMGHNLGMNHD |
6 | 3dslA | 0.31 | 0.31 | 9.48 | 1.33 | HHsearch-2 | | RMYELANIVNEILRYLYMHAALVGLEIWSNGDKITVKPDVDYTLNSFAEWRKTDLLTRKKHDNAQLLTAIDFGPTIGYAYIGSMCHPKRSVAIVEDYSPINLVVAVIMAHEMGHNLGIHHD |
7 | 4j4mA | 0.33 | 0.33 | 9.93 | 2.74 | Neff-PPAS | | RVHQMVSHVTEMYSPLNIATTLSLLRIWSSKDLITVQSDSSVTLGSFGDWRKVVLLSQQAHDCAFLNTATALDDTIGLAYSNGMCDPKFSVGLVQDHSSNVFMVAVTMTHELGHNLGMAHD |
8 | 3k7nA | 0.32 | 0.31 | 9.47 | 1.95 | HHsearch | | KVYEMINAVNTKFRPLKIHIALIGLEIWSNKDKFEVKPAASVTLKSFGEWRETVLLPRKRNDNAQLLTGIDFGNTVGRAYIGSLCKTNESVAIVQDYNRRISLVASTITHELGHNLGIHH- |
9 | 1bswA | 0.34 | 0.34 | 10.15 | 1.49 | PROSPECTOR2 | | FVYEMINTITESYSYLKIDISLSGLEIWSGKDLIDVEASAGNTLKSFGEWRAKDLIHRISHDNAQLLTATDFDATIGLAYVASMCNPKRSVGVIQDHSSVNRLVAITLAHEMAHNLGVSHD |
10 | 3k7nA | 0.33 | 0.32 | 9.69 | 1.52 | SAM | | -VYEMINAVNTKFRPLKIHIALIGLEIWSNKDKFEVKPAASVTLKSFGEWRETVLLPRKRNDNAQLLTGIDFGNTVGRAYIGSLCKTNESVAIVQDYNRRISLVASTITHELGHNLGIHHD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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