Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | GGQNVHVAALARGLARRGHRVEVFTRREDEGSPERVELAPGATVVHVPAGPPTPLPKDELLPYMEEFGRWVRDEWQRTEAPDVVHAHFWMSGLAALAAGRACDVPVVQTFHALGTVKRRFQGADDTSPPDRLRLERDLAQHVDRIIATCTDEVAELRAMGVSPDRVRVIPCG |
1 | 3c4qA1 | 0.27 | 0.26 | 7.86 | 1.55 | SPARKS-K | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAH-------TLAAVDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYADPDRISVVSP- |
2 | 3c4qA1 | 0.28 | 0.26 | 8.01 | 2.31 | FFAS-3D | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTL-------AAVDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHYDADPDRISVVS-- |
3 | 3c4qA | 0.28 | 0.27 | 8.34 | 5.21 | HHpred | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAV-------DTPESEARRICEQQLVDNADVLAVNTQEEMQDLHHYDADPDRISVVSPG |
4 | 3c4qA1 | 0.28 | 0.26 | 8.01 | 2.07 | MUSTER | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA-------VDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHH-ADPDRISVVSP- |
5 | 3c48A | 0.28 | 0.27 | 8.18 | 1.49 | CNFpred | | -GMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHDADPDRISVVSPG |
6 | 3c4qA1 | 0.27 | 0.26 | 7.85 | 0.98 | HHsearch-2 | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVDTP-------ESEARRICEQQLVDNADVLAVNTQEEMQDLHHYDADPDRISVVSP- |
7 | 3c4qA1 | 0.27 | 0.26 | 8.02 | 2.32 | Neff-PPAS | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLA-------AVDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYADPDRISVVSP- |
8 | 3c4qA1 | 0.27 | 0.26 | 7.85 | 1.47 | HHsearch | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVDTP-------ESEARRICEQQLVDNADVLAVNTQEEMQDLHHYDADPDRISVVSP- |
9 | 3c48A1 | 0.28 | 0.27 | 8.36 | 1.71 | PROSPECTOR2 | | QGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK---NSYDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHYDADPDRISVVSPG |
10 | 3c4qA1 | 0.28 | 0.26 | 7.83 | 1.68 | SAM | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAV-----------SEARRICEQQLVDNADVLAVNTQEEMQDLHHYDADPDRISVVS-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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