Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | VTTGIIALETGVGSVWDIMKIPFVRTILEQLGYPSYMLTIMGVWKALGVVILLAPRFPRLKEWVYAGLVFVYSGAAASHLVIGHGADAVGPVIFVCLTIA |
1 | 3wdoA | 0.08 | 0.08 | 3.16 | 0.94 | SPARKS-K | | EPRLLKLNFGIMCLHMLLMSFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFN |
2 | 4pypA2 | 0.13 | 0.13 | 4.48 | 0.76 | FFAS-3D | | LIAVVLQLSQQLSGINAVF--YYSTSIFEKAGVPVYATIGSGIVNTAFTVVSLFVVQRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGF- |
3 | 5b2gA | 0.13 | 0.07 | 2.44 | 0.21 | HHpred | | KTMIVAGVVFLLAGLMVIVPVSNIIQDFYEMGASLYVGWAASGLLLLGGGLLCCS--------------------------------------------- |
4 | 5ezmA3 | 0.10 | 0.09 | 3.30 | 0.87 | MUSTER | | IGMAIVAACGLLASPVVATANHIPNSFYRAY---AVWVAVAFVVMLLGIAVARL-LLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPAS--------- |
5 | 3rkoB | 0.12 | 0.12 | 4.21 | 0.92 | CNFpred | | VSALIHAATMVTAGVYLIAR---THGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFL |
6 | 3jbrE | 0.08 | 0.08 | 3.14 | 0.60 | HHsearch-2 | | APKVRVTLFCILVGIVVVSHWFTTQKEYS--ISAAAISVFSLGFLIMGTICALMAFRDYLLRPASMFYVCLFVLEVMRQSVKRMSFCACAAFVLLFLGGI |
7 | 5d0yA | 0.03 | 0.03 | 1.81 | 0.76 | Neff-PPAS | | FIGSVMLGYLFGPWWGFAGGALSDLVSSAIFGNGFFIGFTLTAALESMIYGFFLYWRVIASVICVTVICYIGLNTLWVSMLGGTNFMVALSSRILKEMIT |
8 | 5x3xQ | 0.11 | 0.11 | 3.94 | 0.42 | HHsearch | | VMRA-TAATCCLLFLATTTPAADLLSGLRRWRVPAELIEIFILAEEAAAMTTAQTRRRWLRSTAQVI-AALLPRALTRRLETGEPAVLGLILTLQAAIL- |
9 | 6mjpF1 | 0.11 | 0.11 | 3.94 | 0.95 | SP3 | | QFAIFFVLFLVFLSQKFIRVLADMILSIVGLNMPAMGLLMLPLSLYIGILLTFGGNKFLIRAALYLALITASVAAFNALWLA---PWSQDKEAHLMEQFA |
10 | 5cwpA2 | 0.07 | 0.07 | 2.87 | 0.56 | PROSPECTOR2 | | SSSDVNEALKLIVEAIEA--AVRALEAAERTGDPEVRELARELVRLAVEAAEEVPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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