Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | KVDTEGVYECTETGLIFEVNRKVDIKYCVLSWSKYADLVVKPWAVGGPMFDVKCDPACLTSIQFPHSLCLGHHDANMTFRVLHVKNSEASLECIVDHSATHVKWHVSSLSPVGPVIQSEETLYHHGAVILYKVIDQNPSLSFRVYVATNNESYIKDIAKAVKHSSKKFMKIDKPPVCLKLLEHGKKYRLVSEPEADITPEEIEFVDGSLLKLKSYIEVYLEQPMEFKLLLVEMDSDEIVWKAKLRECD |
1 | 3g5bA1 | 0.13 | 0.12 | 4.35 | 1.46 | SPARKS-K | | FGCLGGRLTIPGTGVSLLVGKFYDLYLRINKTESTLPLSEGSQTVLSPS--VTCLCRPV-VLTVPHCA--EVIAGDWIFQLKTQAHQGVVTLPCYQLEAKSCHILLDQLGTYVFTGESYSSAVKRLQLAIFAPALTSLEYSLRVYCLEDTPAALKEVLELERTLG--GYLVEEPKPLLFKDSYHNRLSLHPHAHWRSKLQEIPFWNGSQKALHCTFTLERHSLATCKVCVRQVEGEGQIFQLHTTLTT |
2 | 3g5bA1 | 0.14 | 0.12 | 4.30 | 1.07 | FFAS-3D | | --CLGGRLTIPGTGVSLLVPKFYDLYLRINKTESTLPLSEGSQTVLSPSVTCGLLLCRPVVLTVPH--CAEVIAGDWIFQLKTQAHQGHWEEVVTQLEAKSCHILLDQLGTYVFTGESYSRAVKRLQLAIFAPALTSLEYSLRVYCLEDTPAALKEVLELERTLGGY------------LVEEPKPLLFKDSYKLLAKYQEIPFYHGSQKALHCTFTLERHSLASCKVCVRQVEGEGQIFQLHTT--- |
3 | 3g5bA | 0.12 | 0.11 | 3.86 | 1.84 | CNFpred | | -----GRLTIPGTGVSLLVP-FYDLYLRINKTESTLPLSEGSQTVLSPSVTCGPT-CRPVVLTVPHCAEVI----DWIFQLKTQAHHWEEVVTLCQLEAKSCHILLDQLGTYVFTGESY-SAVKRLQLAIFAPALCSLEYSLRVYCLEDTPAALKEVLELERTL--GGYLVEEPKPLLFKDS-YHNLRLSLH-HWRSKLKYQEIPFYH-KALHCTFTLERHSSTEFTCKVCVRQGEGQIFQLHTTL-- |
4 | 3g5bA1 | 0.13 | 0.12 | 4.35 | 1.40 | Neff-PPAS | | --CLGGRLTIPGTGVSLLVGKFYDLYLRINKTESTLPLSEGSQTVLSPSVTCGPTGLLLVVLTVPHCAEVIAGDWGHWEEVVTLDEETLNTPCYCQLEAKSCHILLDQLGTYVFTGESSRSAVKRLQLAIFAPALTSLEYSLRVYCLEDTPAALKEVLELERTLG--GYLVEEPKPLL-FKDSYHNLRLSLHDYQEIPFYHVWNGSQKALHCTFTLERHSLASTEFTCKVCVREGEGQIFQLHTTLTT |
5 | 3g5bA | 0.13 | 0.13 | 4.46 | 1.28 | SPARKS-K | | FGCLGGRLTIPGTGVSLLVGKFYDLYLRINKTESTLPLSEGSQTVLSPS--VTCPTGLLCRLTVPHCA--EVIAGDWIFQLKTQAHQGHEVVTLDELEAKSCHILLDQLGTYVFTGESYSSAVKRLQLAIFAPALTSLEYSLRVYCLEDTPAALKEVLELERTLG--GYLVEEPKPLLFKDSYHNRLSLHPHAHWRSKLQEIPFWNGSQKALHCTFTLERHSLATCKVCVRQVEGEGQIFQLHTTLTT |
6 | 3g5bA | 0.13 | 0.12 | 4.20 | 1.01 | FFAS-3D | | --CLGGRLTIPGTGVSLLVGKFYDLYLRINKTESTLPLSEGSQTVLSPSVTCGLLLCRPVVLTVPH--CAEVIAGDWIFQLKTQAHQGHWEEVVTQLEAKSCHILLDQLGTYVFTGESYSRSAVRLQLAIFAPALCTSLYSLRVYCLEDTPAALKEVLELERTLGGYL------------VEEPKPLLFKDSYKLLAKYQEIPFYHGSQKALHCTFTLERHSLASCKVCVRQVEGEGQIFQLHTTLTT |
7 | 4d8oA | 0.10 | 0.09 | 3.42 | 1.67 | CNFpred | | -----GVLSSTVPQVQAVFP-RIRVGLQAQPHSELVKKILGNKATFSPIVTLEPR-HKPITMTIPVPKASG---DAPTLRLLCSITAQWEDITPLTFVNECVSFTTNVSARFWLIDCRQ-CVPYMAKFVVFAKSHDPIEARLRCFCMTDDK-VDKTLEQQE-----NFAEVARSR--DVEVLEGKPIYVDCFGNLVPLTQHHIFSFFAFKENRLPLFVKVRQEPCGRLSFMKE-QAICNLNITLPIYT |
8 | 3g5bA | 0.12 | 0.12 | 4.25 | 1.01 | Neff-PPAS | | --CLGGRLTIPGTGVSLLVGKFYDLYLRINKTESTLPLSEGSQTVLSPSVTCGPTGLLLVVLTVPHCAEVIAGDWGHWEEVVTLDEETLNTPCYCQLEAKSCHILLDQLGTYVFTGESSRSAVKRLQLAIFAPALTSLEYSLRVYCLEDTPAALKEVLELERTLG--GYLVEEPKPSLHDIPHAHWRSKLLAKYQEIPFYHVWNGSQKALHCTFTLERHSLASTEFTCKVCVREGEGQIFQLHTTLTT |
9 | 4d8oA | 0.10 | 0.10 | 3.56 | 1.22 | SPARKS-K | | IGPEGGVLSSTVVQVQAVFRIRVGLQAQPMH-SELVKKILGNKATFSPIVTLEPRRRKFHTMTIPV--PKASGDAPT-LRLLCSITTPAQWEDILTFVNECVSFTTNVSARFWLIDCRQICVPYMAKFVVFAKSHDPIEARLRCFCMTDDKV------DKTLEQQENFAEVARSRDV--EVLEGKPIYVDCFGNLVPLTQHHIFSFFAFKENRLPLFVKVRDEPCGRLSFMKEPHQA-ICNLNITLPI |
10 | 5f7uA | 0.09 | 0.06 | 2.48 | 1.16 | CNFpred | | -----ITLNMTAPKLYLSFEDLDTLRMELSPTGKET------GHAGKSGYTVEDTA-EKVTVTTEDLSIEIQK---SPYRMEVHQADGTLLTSEY-----------TTANSLGWLTDGK--NVINQYQNNFMTP-----SDEAFYGFGERY--------------------------DTINQRGKDVETYVYNEYQDTYLAVPFFVSA-----NKYGMYVNSDFHSQFQMASKVEDKYSFVLDNDGDM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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