>PF13528 (323 residues) MRILYGVVGEGMGHATRSRVLLEALTKEHEVHIVVSGRAQHYLAQRFQNVHGIWGLTIAY EGNSVKKWQTVLQNLQGAVAGWPQNVRQYFDLVEGFKPDVVVSDFETFSYLFAKRHMLPV ISVDNMQIINRCTHDPALLAGHEESFEASRAIVKAKLPGAFHYLTTTFFYPPVRKRRTTL APSILRPEILAAKPEAGEHLLVYQTATTNTHLPEILKQSGVPCRVYGLRRDLKEDVVDGN LTYRPFSEAGFIDDLRTARAVVAGGGYTLMSEAVYLRKPLLSIPVGGQFEQVLNALYLER LGYGMYVKELSLDALKTFLSRVP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MRILYGVVGEGMGHATRSRVLLEALTKEHEVHIVVSGRAQHYLAQRFQNVHGIWGLTIAYEGNSVKKWQTVLQNLQGAVAGWPQNVRQYFDLVEGFKPDVVVSDFETFSYLFAKRHMLPVISVDNMQIINRCTHDPALLAGHEESFEASRAIVKAKLPGAFHYLTTTFFYPPVRKRRTTLAPSILRPEILAAKPEAGEHLLVYQTATTNTHLPEILKQSGVPCRVYGLRRDLKEDVVDGNLTYRPFSEAGFIDDLRTARAVVAGGGYTLMSEAVYLRKPLLSIPVGGQFEQVLNALYLERLGYGMYVKELSLDALKTFLSRVP | |||||||||||||||||||
1 | 2iyaA | 0.14 | 0.13 | 4.58 | 1.43 | SPARKS-K | RHISFFNIP-GHGHVNPSLGIVQELVAGHRVSYAITDEFAAQVKAAGATPVVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDASWPAPVLGRKWDIPFVQLSPTFVVPAVQDPTAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPIKGDTVGDNYTFVGPTYGRSHQGEGPGDGRPVLLIALGSAYRTCLSAVDGLDWHVVLSGRFVDPADLEVPPNVEVHQWV--PQLDILTKASAFITHAGMGSTMEALSNAVPMVAVPQ--IAEQTMNAERIVELGLGRHIPRVTAEKLREAVLAVA | |||||||||||||
2 | 1f0kA | 0.20 | 0.17 | 5.57 | 1.86 | FFAS-3D | KRLMVMAGGTG-GHVFPGLAVAHHLAQGWQVRWLGTADEADLVPKHGIEIDFIRI-----SGLRGKGIKALIAAPLRIF----NAWRQARAIMKAYKPDVVLGMGGYVSGLAAWSLGIPVVLHEQNG--------------------IAGLTNKWLAKIATKVMQ----AFPGAFPNAEVVGNPVRTDVLALPLEGPVRVLVVGGSQGARILNQTMPQVSVTIWHQSGKGSQQSVEQAPQHKVTEFI-DDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHDRQQYWNALPLEKAGAAKIIEQLSVDAVANTLAGW- | |||||||||||||
3 | 1f0kA | 0.18 | 0.16 | 5.32 | 1.97 | HHpred | KRLMVMAGGTG-GHVFPGLAVAHHLMAGWQVRWLGTADRMELVPKGI-EIDFIRISGLR-GKG---I----KALIAAPLR-IFNAWRQARAIMKAYKPDVVLGMGGYVSGLAAWSLGIPVVL--HEQ-----NG---IAG----------LTNKWLAKIATK-VMQAFPGA---FPNAEVVGNPVRTDVLALPLPREGPVRVLVVGGSARTMPQVAAKLGDSVTIWHQSGKGSQSVAGPQHKVTEFID-DMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKRQQYWNALPLEKAGAAKIIEQLSVDAVANTLAGWS | |||||||||||||
4 | 3tsaA | 0.17 | 0.16 | 5.32 | 1.44 | MUSTER | MRVLVVPLP-YPTHLMAMVPLCWALQASHEVLIAAPPELQATAHGAGLTTAGILRFPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVALIGRVLGGLLDLPVVLHRWGVDPTAGPFSDRA---HELLDPVCRHHGLTGLPTPELILDPCPLQASDAPQGAPVQYVPYNFPAWGAARTSARRVCICMGPAPLLRAVAAATELGVEAVIAVPPEHRALLTLPDNARIAESV--PLNLFLRTCELVICAGGSGTAFTATRLGIPQLVLPQYF--DQFDYARNLAAAGAGICLPDSDHEQFTDSIATVT | |||||||||||||
5 | 2iyaA | 0.13 | 0.13 | 4.49 | 2.00 | CNFpred | PRHISFFNIPGHGHVNPSLGIVQELVRGHRVSYAITDEFAAQVKAAGATPVVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIAWPAPVLGRKWDIPFVQLSPTFVAYEGFEVPAVQDLVRFFTRLSAFLEEHGVD-PNRCIVALPRTGDTVGDNYTFVGPTYGD-TWEGPGDGRPVLLIALGSA-YRTCLSAVDGLDWHVVLSVGRFVDDLGEVPPNVEVHQWV--PQLDILTKASAFITHAGMGSTMEALSNAVPMVAVPQ--IAEQTMNAERIVELGLGRHIPQVTAEKLREAVLAVA | |||||||||||||
6 | 3ia7A | 0.17 | 0.17 | 5.50 | 0.68 | HHsearch-2 | RHILFANVQG-HGHVYPSLGLVSELARGHRITYVTTPLFADEVKAGA-EVVLYKSEFDTFHVPVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVPIAGRLLAARWDRPAVRLTGGFAANEHYSLFKQRDVEAVHSVLVDLLGKYGVDTEGLTIVFLPFQPFTFDERFAFVGPTLTGPGWQPPRPDAPVLLVSLGNQFPEACAQAFADTPWHVVAIGGFLDPAVGPLPPNVEAHQWIP-F-HSVLAHARACLTHGTTGAVLEAFAAGVPLVLVPH--FAEAAPSAERVIELGLGSVLRQLEPASIREAVERLA | |||||||||||||
7 | 3otgA | 0.15 | 0.15 | 5.08 | 1.80 | Neff-PPAS | HRVLFASLG-THGHTYPLLPLATAARAAHEVTFATGEGFAGTLRKLGFEPVATGRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISYGAGLAALKAGIPTICHGVGRDTPDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFEPEFRARPRRHELRPVPLPAWLSSRDTARPLVYLTLGTSSGRAAIDGLAGLDADVLVASGPDVSGLGEVPANVRLESWV--PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWAG--DSFANAQAVAQAGAGDHLLNISPDSVSGAAKRLL | |||||||||||||
8 | 1f0kA | 0.17 | 0.15 | 4.98 | 1.10 | HHsearch | KRLMVMAGGTG-GHVFPGLAVAHHLMAGWQVRWLGTADRMELVPHGI-EIDFIRISGLR---GK-GIKAL-IAAPL---R-IFNAWRQARAIMKAYKPDVVLGMGGGPGGLAAWSLGIPVVLHEQNG----------IAGL--TNKW--------LAKIATKVMQAFPGA----FPNAEVVGNPVRTDVLALPLREGPVRVLVVGGSQGRTMPQVAAKLGVTIHQSGKGSQQSVAGQP-QHKVTEF-IDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKRQQYWNALPLEKAGAAKIIEQPSVDAVANTLAGW- | |||||||||||||
9 | 3wadA | 0.14 | 0.14 | 4.67 | 2.07 | PROSPECTOR2 | MRVLMTVFA-NRSHLYNMVPLAWALTAGHEVHIASHPDNVQAISDSGLTAVPVGNDLNIMAALTLNHDVFAQYSQIYEYMADSTMTADLVAHARQWQPDLVIWALTYAGPIAAEAVGAPHVRMLFGLDQWLTGERAADDRHDPLADWLATKGEPHGVAFTESLVTGTPSEQPALSMRHLPFNGPAVLPDWLREAPSRPRVCLTLLNVTLADFVNAVADIDADVVATFSAEQVAEIGLPDNVRAVDFV--PLHALLPSCAAIVHHGGGGTRTNAIRYGVPQLIVPNWLW-DEGYVAERFAERGAALVTEDLTPDRLRDQLRRLR | |||||||||||||
10 | 2yjnA | 0.16 | 0.15 | 4.86 | 2.43 | SAM | MRVVFSSMAS-KSHLFGLVPLAWAFRAGHEVRVVASPALTEDITAGL-TAVPVGTDVDLVDFMT---T-LTWEHLLGMQMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAPIAAAVTGTPHARLLWGPDITTRARQ--NF--DPLAEWLTWTLEKYGGVVGQWDPAPAARLDT--MRYVDYNGPSVVPEWLHD-EPERRRVCLTLQVSI--ELLGAVGDVDAEIIATFDAQQLEGVNIPDNVRTVGF-P--MHALLPTCAATVHHGGPGSWHTAAIHGVPQVILPD--GWDTGVRAQRTQEFGAGIALPELTPDQLRESVKRV- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |