Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | ERIQIVNYCIQHQKNYQLTAENYEVSYQQVYQWVKKFEAHGEEALQDKRGRKK |
1 | 4lb5A | 0.15 | 0.15 | 5.08 | 1.25 | SPARKS-K | | IEMRICDYLRRHRSTVQDIFKELKLEKSTVNRHLYSLQASKQVFKTVKRPVWN |
2 | 2jrtA | 0.23 | 0.23 | 7.11 | 1.28 | MUSTER | | RKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQKY |
3 | 2gloA | 0.15 | 0.13 | 4.45 | 1.39 | Neff-PPAS | | FKLQVLESYRNDKGNQRATARKYNIHRRQIQKWLQCESNLRSSVANN------ |
4 | 2vxzA1 | 0.11 | 0.11 | 4.06 | 1.17 | SPARKS-K | | RLRDILALLADGCKTTSLIQQRLGLSHGRAKALIYVLEKEGRVTRVAFGNVAL |
5 | 2ezlA | 0.19 | 0.19 | 6.09 | 0.83 | FFAS-3D | | KWLPAVQAALNQGISFATVAGHYQVSASTLRDKYYQVQPDWAAALVDGRGASR |
6 | 1pdnC | 0.13 | 0.13 | 4.55 | 0.78 | HHpred | | IRLKIVEMAA-DGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGSKPR |
7 | 2oa4A | 0.23 | 0.23 | 7.11 | 1.20 | MUSTER | | RKIAVVRGVIYGLITLAEAKQTYGLSDEEFNSWVSALAEHGKDALKVTALKKY |
8 | 2jrtA | 0.23 | 0.23 | 7.11 | 0.67 | CNFpred | | RKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQKY |
9 | 2oa4A | 0.21 | 0.21 | 6.60 | 0.53 | HHsearch-2 | | RKIAVVRGVIYGLITLAEAKQTYGLSDEEFNSWVSALAEHGKDALKVTALHHH |
10 | 2jrtA | 0.23 | 0.23 | 7.11 | 1.36 | Neff-PPAS | | RKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQKY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|