Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | RNLRANVRRYLNRVETEFSKPVLSKSIGSAEMSAGVGRFGELESAGWKGKAGTAISIDNEQGAFYSEVLRLFALSDQAAVYELRIGDQLAASRLAIVNDRMFVILKTTYDETLARFAPGRILLQRIIQEQLDLQTAKTIEFYTN |
1 | 1xf8A | 0.09 | 0.08 | 3.15 | 1.71 | SPARKS-K | | DLYPSKTKSKIKRPFRDG--VEVHSGNS----ATELDEFFKTYTTMAERHGITH-----RPIEYFQRMQAAF-DADTMRIFVAEREGKLLSTGIALKYGRKIWFMYAGSMDGNTY-YAPYAVQSEMIQWALDTN-TDLYDLGGI |
2 | 1xf8A2 | 0.09 | 0.08 | 3.14 | 1.46 | FFAS-3D | | DLYPSKTKSKIKRPFRDG--VEVHSGNSATELDEFFKTYTTMAERHGITHRP---------IEYFQRMQAA-FDADTMRIFVAEREGKLLSTGIALKYGRKIWFMYAGSMDGNTYYAP-YAVQSEMIQWALDT-NTDLYDLG-- |
3 | 1xf8A2 | 0.09 | 0.08 | 3.15 | 1.11 | HHpred | | DLYPSKTKSKIKRPFRDG--VEVHSGNSATELDEFFKTYTTMAER-----HGI----THRPIEYFQRMQAAFDA-DTMRIFVAEREGKLLSTGIALKYGRKIWFMYAGSMDG-NTYYAPYAVQSEMIQWALDT-NTDLYDLGGI |
4 | 1xf8A2 | 0.09 | 0.08 | 3.15 | 1.61 | MUSTER | | DLYPSKTKSKIKRPFRDG--VEVHSGNS----ATELDEFFKTYTTMAERHG-----ITHRPIEYFQRMQAAF-DADTMRIFVAEREGKLLSTGIALKYGRKIWFMYAGSMDG-NTYYAPYAVQSEMIQWALDT-NTDLYDLGGI |
5 | 1xf8A | 0.09 | 0.08 | 3.15 | 1.39 | CNFpred | | DLYPSKTKSKIKRPFRD--GVEVHSGN----SATELDEFFKTYTTMAERHG-----ITHRPIEYFQRMQAAFD-ADTMRIFVAEREGKLLSTGIALKYGRKIWFMYAGSMDG-NTYYAPYAVQSEMIQWALDT-NTDLYDLGGI |
6 | 1xf8A | 0.08 | 0.08 | 2.97 | 1.49 | HHsearch-2 | | DLYPSKTKSKIKRPFRDG--VEVHSGNS----ATELDEFFKTYTTMAERHG-IT----HRPIEYFQRMQAAFDA-DTMRIFVAEREGKLLSTGIALKYGRKIWFMYAGSMDG-NTYYAPYAVQSEMIQWALDT-NTDLYDLGGI |
7 | 1lrzA2 | 0.13 | 0.10 | 3.59 | 1.62 | Neff-PPAS | | KNMDGLRKRNTKKVKKNG--VKVRFLS-----EEELPIFRSFMD-----------------DKFYYNRLKYYKDR--VLVPLAYI-ELPISAGFFFINPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHG-IDRYN---- |
8 | 1xf8A2 | 0.09 | 0.08 | 2.96 | 2.37 | HHsearch | | DLYPSKTKSKIKRPFRDG--VEVHSGNS----ATELDEFFKTYTTMAERHG-IT----HRPIEYFQRMQAAFDA-DTMRIFVAEREGKLLSTGIALKYGRKIWFMYAGSMDG-NTYYAPYAVQSEMIQWALDT-NTDLYDLGG- |
9 | 1ne9A2 | 0.08 | 0.08 | 2.97 | 1.29 | PROSPECTOR2 | | DLYPSKTKSKIKRPFRDG--VEVHSGNS----ATELDEFFKTYTTMAERHGITHRP-----IEYFQRMQAA-FDADTMRIFVAEREGKLLSTGIALKYGRKIWYMYAGSMDG-NTYYAPYAVQSEMIQWALDT-NTDLYDLGGI |
10 | 1xf8A | 0.09 | 0.08 | 3.14 | 1.47 | SAM | | -LYPSKTKSKIKRPFRDG--VEVHSGN----SATELDEFFKTYTTMAERHG-----ITHRPIEYFQRMQAAFDA-DTMRIFVAEREGKLLSTGIALKYGRKIWFMYAGSMDG-NTYYAPYAVQSEMIQWALDT-NTDLYDLGG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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