Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | EDKTLVCKDCGNEFIFTVGEQEFYKEKGFDNEPVRCPDCRRARKQQRN |
1 | 1xpaA1 | 0.26 | 0.21 | 6.44 | 1.39 | SPARKS-K | | EFDYVICEECGKEFM----DSYLMNHFDLPT----CDNCRDADDKHK- |
2 | 3hcsA2 | 0.17 | 0.17 | 5.46 | 1.84 | MUSTER | | EFALMDCPQCQR--PFQKFHINIHILKDCPRRQVSCDNCAASFEDKEI |
3 | 1xpaA1 | 0.26 | 0.21 | 6.44 | 1.36 | Neff-PPAS | | EFDYVICEECGKEFM----DSYLMNHFDLP----TCDNCRDADDKHK- |
4 | 3hcsA2 | 0.20 | 0.19 | 6.02 | 1.36 | SPARKS-K | | EFALMDCPQCQRP--FQKFHINIHILKDCPRRQVSCDNCAFEDKEIHD |
5 | 2ewlA | 0.15 | 0.12 | 4.21 | 0.47 | FFAS-3D | | ---LCVCCKCDGRIELSAEDLRTLQQLFLSTLSFVCPWCATNQ----- |
6 | 4mtdA | 0.18 | 0.17 | 5.42 | 0.28 | HHpred | | -SAMFICDRCGAVKEECAEGVEDIAKMGFAEAHGLCAACVEVEAC--- |
7 | 5v3jE3 | 0.16 | 0.15 | 4.85 | 1.52 | MUSTER | | ---RFECKDCDKVYS-CASQLALHQMSHTGEKPHKCKECGKGFISDSH |
8 | 2hjhA | 0.20 | 0.17 | 5.35 | 0.79 | CNFpred | | --ATATCVTCHWNLPGE-RIFNKIRNL----ELPLCPYCYKKRREYFP |
9 | 1vzyA | 0.24 | 0.15 | 4.54 | 0.35 | HHsearch-2 | | GQAEAVCHFCNEKYLFTKEELEGLRDQTT------------------- |
10 | 2puyB | 0.17 | 0.15 | 4.79 | 1.33 | Neff-PPAS | | -GQLLMCDTCSRVYHLDCL------DPPLKTIPKGCPRCQDQMLKKEE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|