Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LRYKVFAEEMGAKMPGQEERIDQDRYDRYCDHLLVRDTDTNEVVGTYRILSPDQAKKAGGYYSEGEFDLSRLDNLRSSMVEVGRSCVHPDYRGGGVITLLWA |
1 | 5w8aA | 0.24 | 0.23 | 7.03 | 1.48 | SPARKS-K | | LRHDIFVEERHWETLRRPDGREVDSYDDEDTVYLLALEG-RRVVGGHRLYPTT-----KPSMMSEVFPAVRGCPSDPLIWEWSRYFVVRDRRDGALNLQLMA |
2 | 5w8aA | 0.21 | 0.21 | 6.52 | 1.53 | FFAS-3D | | LRHDIFVEERHWETLRRPDGREVDSYDDEDTVYLLAL-EGRRVVGGHRLYPTTKPSMMSEVFPH--LAAVRGCPSDPLIWEWSRYFVVRDRRDGALNLQLM- |
3 | 5w8aA | 0.22 | 0.22 | 6.78 | 1.87 | HHpred | | LRHDIFVEERHWETLRRPDGREVDSYDDDTVYLLALEG--RRVVGGHRLYPTTKPSMMSEVFPHLA-AVRG-CPSDPLIWEWSRYFVVRDRRDGALNLQLMA |
4 | 5w8aA | 0.23 | 0.23 | 7.05 | 1.82 | MUSTER | | LRHDIFVEERHWETLRRPDGREVDSYDEDTVYLLALEG--RRVVGGHRLYPTTKPSMMSEVFPHLAAV--RGCPSDPLIWEWSRYFVVRDRRDGALNLQLMA |
5 | 5w8cA | 0.23 | 0.22 | 6.77 | 1.59 | CNFpred | | LRHDIFVEERHWETLRRPDGREVDSYDDDTVYLLALEG--RRVVGGHRLYPTTKPSMMSEV--PHLAAVRGCP-SDPLIWEWSRYFVVRDRRDGALNLQLMA |
6 | 5w8aA | 0.23 | 0.23 | 7.05 | 0.77 | HHsearch-2 | | LRHDIFVEERHWETLRRPDGREVDSYDDDTVYLLALEG--RRVVGGHRLYPTTKPSMMSEVFPH-LAAV-RGCPSDPLIWEWSRYFVVRDRRDGALNLQLMA |
7 | 5w8aA | 0.22 | 0.22 | 6.79 | 1.70 | Neff-PPAS | | LRHDIFVEERHWETLRRPDGREVDSYDDEDTVYLLALEG-RRVVGGHRLYPTTKPSMMSEVFPHLAA--VRGCPSDPLIWEWSRYFVVRDRRDGALNLQLMA |
8 | 5w8aA | 0.22 | 0.21 | 6.51 | 1.14 | HHsearch | | LRHDIFVEERHWETLRRPDGREVDSYDDDTVYLLALEG--RRVVGGHRLYPTTKPSMMSEVFPHL-AAVR-GCPSDPLIWEWSRYFVVRDRRDGALNLQLM- |
9 | 5w8aA | 0.21 | 0.21 | 6.53 | 0.80 | PROSPECTOR2 | | LRHDIFVEERHWETLRRPDGREVDSYDDEDTVYLLALE-GRRVVGGHRLYPTTKPSMMSEVFPHLAAV--RGCPSDPLIWEWSRYFVVRDRRDGALNLQLMC |
10 | 1kzfA | 0.13 | 0.12 | 4.08 | 0.90 | SAM | | ----TFSDRLGWEVIC-SQGMESDEFDGPGTRYILGIC-EGQLVCSVRFTSLDRPNMITHTFQHCFS---DVTLPAYG-TESSRFFVDKARARAPISQVLFL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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