Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LGSQKSSSQQHQEQTSVTGSTLTAGNNLTINATGDGHPANSGDIVVQGSQLKAGGDTTLDAARDVLLLSAANTQKTDGSNSSSGGSVGVSVGLNGTSSGLSIFANANKGQGNEHGNSTTWTETQIDTGGTLSLSSGRDTSLAGAQVSGETVKVDVGRDLLLQSQQDSDNYDSKQTS |
1 | 3jx8A | 0.12 | 0.07 | 2.62 | 1.56 | CNFpred | | ------------------SGSFIISNRMEINMAG------SGNVELRGPVKGYKLECNMAGSGNIIAKDIQLD------------NLSCSLAS---SGEIEVIGTV------------DRASFNVAGSGEIKAFD---CQARKAECNIGEISVYATQILDANIV------------ |
2 | 6n2cA2 | 0.10 | 0.10 | 3.59 | 1.13 | Neff-PPAS | | YGLFSSDKIIFNNNITVTTRNMYSSSDITLRSDNNRPGDKADNIIVKNGSFIFGGNNKVVVNNLMYTKNGITFNGNNNRLESNSLLFSDGTISLSGKDEIVANALFCDTLDIRNGSSNLVTINEFAYFNKLNIWTDKMVLKSNSKLFGGDIEIRNDGILSAD----VGTVVYQIPY |
3 | 1rwrA2 | 0.11 | 0.10 | 3.65 | 0.94 | SPARKS-K | | -------------LTLTTGRPSVNGGRIGLDVQQGTVTTGLGYFDVVARLVKLQGA--VSSKQDIAVVAGANRYDHATRRATPIAAGA--RGAAAGAYAIDGYGKHITLVSSDSGLGVRQLG-SLSSPSAITVSSQGEIALGDATVQRGPLSLKGAGVVSAGKLASGGGAVNVAG- |
4 | 6mitC | 0.10 | 0.08 | 2.98 | 0.67 | FFAS-3D | | ----------TYKSDHSDTVVYSPEGALNLIAQHVEYFSDDGISWFTQPVM-----TTFDKDKVPTWSIKSDRAKLTNDRMLYLYGHVEVNALTADSQLRKITTDN---------AQINLVTQDVTSQDLVTLYGTT------FNSSGLRMRGNLRSKAELIEKVRTSYEIQNKQT |
5 | 1rwrA2 | 0.15 | 0.11 | 3.85 | 0.28 | HHpred | | ---------------RI-GLDV-QQGTVTIERG--GVNAGLGYFDVVARLVKLQGA--VSSKQDIAVVAGANRYDHATRRATPIAA----GARGAAAGAYAIDGTAAYKHISDSGLGVRQ-LGSLSSPSAITVSSQGEIALGDATVQRGPLSLKGAGVV-SAGK------------ |
6 | 6beaA3 | 0.16 | 0.15 | 4.90 | 0.97 | MUSTER | | --AQKGNDGDATDNITLADSNIINGGIETIVTAGNKTGIHTVNLNIKGSVIGAANNQTIYASASAQGAGSATQNLNLSVADSTIYSDVLALSESENSASTTTNVNMNVARSYWEGNAYTFNSGD-KAGSDLDINLSDSSVWKGKVSGAGDASVSLQNG----SVWNVT-------- |
7 | 3lycA | 0.10 | 0.07 | 2.53 | 1.49 | CNFpred | | ------------------STHVNIN-EFEAGLAG------SGIIQFHD-TASF-TNLKIEIAGSGDFVGHKVYCE----------ELNGDMAG-----SNTIVLGG------------TVGIAEFSIAGSGTVRAF-DCTMDELECKIGDIEAFVVNKIKAEIAGGSVKYKGDPQD |
8 | 1rwrA2 | 0.13 | 0.12 | 4.12 | 0.91 | HHsearch-2 | | LTLTTGRPSVN--GGRI-GLDV-QQGTVTIERG--GVNATLGYFDVVARLVKLQGA--VSSKQDIAVVAGANRYDHATRRATPIAA----GARGAAAGAYAIDGTAAGKHISDSGLGVRQ-LGSLSSPSAITVSSQGEIALGDATVQRGPLSLKGAGVV-S-AG--KLASGGGAVN |
9 | 6beaA3 | 0.11 | 0.10 | 3.65 | 1.10 | Neff-PPAS | | ----QGFDGDATDNITLADSNIINGGIETIVTAGNKTGIHTVNLNIKGSVIGAKQTIYASASAQGAGSATQNLNLSVADSTIYSDVLALSESENSASTTTNVNMNVARSYWEGNAYTFNSGD---KAGSDLDINLSDSSVWKGKVSGAGDASVSLQNGSVWNVT------------ |
10 | 1rwrA2 | 0.18 | 0.10 | 3.13 | 0.69 | HHsearch | | AGANTRRATAYAIDGTAAGA--MYGKHITLVSSDSG-----LGVRQLGS-LSSPSAITVSSQGEIALGDATVQRG-PLSLKGAGV----------------VSAG----K--------------LASGGAVNVA--------G--------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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