Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | YFTKEWFEEAQISRFLLFPETKKEWDENVAWHVSEGLHFEEIQLNRLQIAKKDLLRFLPAFFHPYIQDGTLNSQFPSEELKKMADQWRMEYDERTKAKGISYRNYYNSIKCSLPENAIQLFEKSLHDARVTSIEMPMKDAFIIKLDCRGGYHYGTDVTLTFAGVKKLQPHSLSVGSIWLYDEVYLTDTGFELHVLFDGPLMEFTIS |
1 | 4uosA | 0.11 | 0.08 | 2.99 | 0.90 | SPARKS-K | | EKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDMAEKILKMVIELAEKILKKAAEKILKKVKELGVD----NEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEISEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG---------------------------------------------- |
2 | 3uunA | 0.12 | 0.06 | 2.22 | 0.78 | FFAS-3D | | --------EVNLDRYQTALEEVLSWEDTLQAQGEISNDVEKDQFHTHEGYMMDLTAH--QGRVGNILSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDL------------------------------------------------------------------------------------------ |
3 | 2marA | 0.14 | 0.08 | 2.65 | 0.27 | HHpred | | -APQDVVKAFFEDETKTD---PEIEKDLDAWVDTLGGDYKAKFEKEMKAKEAELAKAHEE----AV-------AKMTPEAKKADAELSK-IAEDDSLNGIQKAQKIQAIYKTLPQSVKDELEKGIGPAV----------------------------------------------------------------------------- |
4 | 1jkyA | 0.12 | 0.12 | 4.26 | 0.64 | MUSTER | | YMDKFNEQEINLSLEELKDQRWEKIKQHYQHWSDSLSEEGRGLLKKLQIPKDDIIHSLSQEEKELLKRIQISSDFLSTEEKEFLKKLQIDIREEEKELLNRIQVDSSNPLSEKEKEFLKKLKLDIQPYDINQRLQDTGGLI----SPSINLDVRKQYKRDIQNIDHQSIGSTLYNKIYLYENMNINNLTATLGADLVDSTDNTKIN |
5 | 4aurA | 0.13 | 0.08 | 2.68 | 0.53 | CNFpred | | TLASRHLDELNTF-VEKNDEDMHRFSNDIKQSRIEVKRLAGELFEELNLMEKQLMSQLRPLIRPFMDDELGYTDGVGFKLHLRIKQSVDRFFEQSTAVSQRLSDDITRQLSSSESFLSGLGE------------------------------------------------------------------------------------ |
6 | 3u1wA1 | 0.13 | 0.03 | 1.18 | 0.41 | HHsearch-2 | | ------------------------------------------------------------------------------------------------------------QGIIPLPPVENAFQEKYPDAKNPVFEIE-GNYYVVDFNNGG-----SETTAWFTDQGIWEK------------------------------------- |
7 | 5hamA | 0.11 | 0.10 | 3.69 | 0.71 | Neff-PPAS | | YTENEITHLLTAQKFSVQPRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANL-------IPDKEERALMLGDA-KKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNG-KEAAVIPIEMGYGHWTVLVAKYD---KKDNQIILTFNDSLGNSINYDGQKLPLIDKTLGNLPNKPIIIDEQTKQQTDQSAC |
8 | 3u1wA1 | 0.13 | 0.03 | 1.18 | 0.42 | HHsearch | | ------------------------------------------------------------------------------------------------------------QGIIPLPPVENAFQEKYPDAKNPVFEIE-GNYYVVDFNNGG-----SETTAWFTDQGIWEK------------------------------------- |
9 | 4tqlA1 | 0.10 | 0.07 | 2.70 | 0.72 | SP3 | | --YKQMVQELEKA--------RDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKKN-----IDDLKKIAEDLIK---KAEENIKEAKKI----AEQLVKRAKQLIE-------------------------------- |
10 | 5hamA | 0.12 | 0.11 | 3.95 | 0.80 | PROSPECTOR2 | | WYTENEITHLLTAQLITFRNT--ALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLG--------DAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVIPIEMGYGHWTVLVAKYDK---KDNQIILTFNDSLGNSINNLPNKPIIIDEQTKQQTDQSAAQILTDAMFKQDAQQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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