Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | ATCKNYLQVQNEGAREVKRQSKHYNLEMIIAVGYRVRSHRGTQFRQWATERLNEFMVKGFTMDDERLKEMRNIGADYFDELLERIRDIRASERRFYQKITDIYATSIDYDPNSTIAREFFATVQNKLHFAIHGHTASELIVERADATKPNMGLTSWKGDKVRKNDVTVAKNYLTQEELSDLNRIVTMYLDYAESQAKKKKPMHMKDWAQKLDAFLEFNEHDILTNAGKISAKLAEQFAKEQYEVFHQQRL |
1 | 1vt4I3 | 0.14 | 0.08 | 2.74 | 1.44 | HHsearch-2 | | ----------------------EYALHR---------------------SIVDHYNIPKTFDSD-DLIPPY-LDQYFYSHIGHHLKNIEHPE---RMTLF-----------------------------RMVFLDFRFLEQKIRH-DS-----TAWNASGSILNTLQQLKFYKPYICDND-PKYERLVNAILD--------------------FLPKIEENLI--CSKYTDLLRIALMAEDEAIFEEAHK |
2 | 3dd7A | 0.13 | 0.06 | 1.96 | 1.00 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------MRHISPEELIALHDANISRYGGLPGMGRAEAIIGRVQARVAY-EEITDLFEVSATYLVATAYIFND--ANKRTALNSALL------FLRRNGVQVFDS-PEL-ADLTVGAATSSVADTLRRL- |
3 | 5cwmA | 0.13 | 0.11 | 3.75 | 0.96 | SPARKS-K | | --------------------------------DPEDELKRVEKLVKEAEELLRQAKEKG---SEEDLEKALRTAEEAAREAKKVLEQAEKEALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDP--EVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKEVARRAVELVKRVAELLERIARESG----SEEAKERAERVREEARELQE |
4 | 5j1fA | 0.12 | 0.09 | 3.11 | 0.84 | FFAS-3D | | ------------------------------------SHMAYAQFFSDVRE-AEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVGSGNQEAQEAVTRL----------EAQHQALVTLWH-----------------QLHVDMKSLLAWQSLRRDVQLIRSWSLATFRTLKPEEQRQALHSLELHYQAFLRDQDAGGFGPEDRLMAEREYGSCSHHYQQLLQS-- |
5 | 3dd7A | 0.13 | 0.06 | 1.95 | 0.63 | HHpred | | -------------------------------------------------------------------------------------------------------------------------------MRHISPEELIALHDANISRYGGLPGMGRAEAIIGRVQARVAY-EEITDLFEVSATYLVATAYIFND--ANKRTALNSALL------FLRRNGVQVFDS--PELADLTVGAATGSVADTLR--- |
6 | 5cwmA | 0.14 | 0.12 | 3.94 | 0.75 | MUSTER | | --------------------------------------KRVEKLVKEAEELLRQAKEKG---SEEDLEKALRTAEEAAREAKKVLEQAEKEDPEVALRAVELVVRVAE--AKESGSEEALERALRVAEEA--ARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLIAKESGSEEALERALRVAEEAARLAKRVLELAEPEVARRAVELVKRVAELL-ERIARESGS-RAERVREEARELQERVKELRE |
7 | 5uwtC | 0.07 | 0.05 | 2.11 | 0.67 | CNFpred | | --------------------------------------------QDMACDTFIKIVQK---CKYHFVIQQPRESEPFIQTIIRDIQKTTDLQPQQVHTFYKACGIIISEERSVAERNRLLSDL-----MQLPNMAWDTIVEQSTANP----------------------TLLLDSETVKIIANIIKTNVAVCTSMGADFYPQIYYNMLQLYRAVSSMISAQVAAEGLIATVRGLRTIKKEILKLVETYIS |
8 | 3dd7A | 0.12 | 0.06 | 1.96 | 1.17 | HHsearch-2 | | -------------------------------------------------------------------------------------------------------------------------------MRHISPEELIALHDANISRYGGLPGMGRAEAIIGRVQARVAY-EEITDLFEVSATYLVATAYIFND--ANKRTALNSALL------FLRRNGVQVFDS-PEL-ADLTVGAATSSVADTLRRLY |
9 | 5cwmA | 0.12 | 0.10 | 3.54 | 0.90 | Neff-PPAS | | -------------------------------------LKRVEKLVKEAEELLRQAKEKG---SEEDLEKALRTAEEAAREAKKVLEQAEKEDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQE |
10 | 4xi8A2 | 0.08 | 0.03 | 1.11 | 0.82 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------NKIEGLKRIDQILAE--------------------KNNFQGLRKEFIHEVSTVFILLNRPFMV--GNKYVQRIFFEQ------IAEAAGHKLDFS--VVTEKRAIHAALTPMLHLFEDI- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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