Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TALWHRLEKEGRLRKGRDGNINQTTLMNFTPTRPIEDIAQEYVDAFWQLYDPHAYLDRVYHCFLKLGAPTAKPPAKLPTLVDLKALAIVIWRQGIKRNTRWKFWHHLFSIIKHNPEVWEHYLTMCAHNEHFLEYRQIVKEQIE |
1 | 2x3mA | 0.11 | 0.10 | 3.78 | 0.93 | SPARKS-K | | MYWYTRTYLEEAKDIRPDIADALARGMAGLAFGRTDWVASMLPQIMRHIYTVARIYSETRDMLRRVS-----DYYISLTTMELGKVADIIAEAKAKGENPEVVAREIAEAVRLSPKSLYFNLYYIGRSIYVLEVARVLSKM-- |
2 | 5kzlA | 0.09 | 0.08 | 3.17 | 0.89 | FFAS-3D | | MSLATILREGTSEEHKAAESS-----------AFIRSFMGTYARHLEAFY---YVYESMEEELERNKNNLVLKSIYFPELYRKNALLEDLQFFYGPSVATQDYVQRIRKISETQPELLAAHSYVRYLGDLSQILKKVAARALN |
3 | 2p62A2 | 0.09 | 0.06 | 2.42 | 0.22 | HHpred | | -------------------GNLTLNEPFVKEKKELELSLAYL---AK----LDGILEKYRGSMRALSQDK----GDKLTPKDVMHILSIAN--DYTGDLSGLYEKYIGIMIHRNRELLIRFLSEVNLLPLLERMV-------- |
4 | 6azhA2 | 0.13 | 0.10 | 3.37 | 0.69 | MUSTER | | ----------------------------------LEIWHEKLTDIENLEDEPIEKLKKLFKQFELLYNRAFFKVSQLWGKETRQDELRNKITE-----YIEGIERILKEAISKDISLLAHSLFGSLISTSLYELVNKVIDEIT |
5 | 4gmxC | 0.07 | 0.05 | 2.03 | 0.65 | CNFpred | | -----------------------------------IQLYKSEREVLVYLTNVIDTEEIMISKLARQI------DGSEWSWHNINTLSWAIGSISMSEDTEKRFVVTVIKDLLDLC-KDNKAVVASDIMYVVGQYPRFLKAHWN |
6 | 6fd2B | 0.12 | 0.06 | 1.97 | 0.80 | HHsearch-2 | | TELHQIAVDKGWIDG-SQN-AFTSHNAVMHTDLSIGDLERASRFVDELHAVCKAEFQARVHAWSTGDA--------------------------------------------------------------------------- |
7 | 5an3A | 0.07 | 0.06 | 2.57 | 0.70 | Neff-PPAS | | ---VEKDLKTAYKALYDEKE--------------PLKALHLYDEILKGSPTNLTALIFKAACLEKLYFGFSDWHSDATMENAKELLDKALMTAEGDRSKIGLVNFRYFVHFFNIQSYFKKAKNLGYVDDTLPLWEDRLETK-- |
8 | 6fd2B3 | 0.12 | 0.06 | 2.20 | 0.98 | HHsearch | | TELHQIAVDKGWIDGS-QN-AFTSHNAVMHTDLSIGDLERASRFVDELHAVCKA-GPAERAEFQAR--------------------V-HAWSTGDA----------------------------------------------- |
9 | 1ouqA1 | 0.08 | 0.06 | 2.45 | 0.93 | SP3 | | ---------------NLPALPVDATSD------EVRKNLMDMFRDRQAF--SEHTWKMLLSVCRSWAAKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRLPRPSDS------------NAVSLVMRRIR |
10 | 2ppqA2 | 0.07 | 0.06 | 2.66 | 0.62 | PROSPECTOR2 | | KPFFLGLAAKGLSWLRKPELASEGFEIKRPNALSVDGWKVLWDKSEERADGLREEIRPEIDYLAAHWPKDLPEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLLSRGS-----ALRFFLTRLYDWLEYLRKLRFHRTILA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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