Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KRTAEIVLGVIGAILYALFTFFGIVLMTLKGNDEFIQEMENAFAEQGMENMGSISEMISGGSWYLIIVSLVAIILGIVAIVFLKGNKKPKAAGIILIITAVLSFV |
1 | 3jbrE | 0.08 | 0.08 | 3.06 | 0.94 | SPARKS-K | | KVRVTLFCILVGIVLAMTAVVTTQKEYSISAAAISVFSLGFLIMGTICFRKKRDYLLRPASMFYVFAGLCLFVSLEVMRQSVKRMIYYACAAFVLLFLGGISLLL |
2 | 4xydA1 | 0.11 | 0.10 | 3.47 | 0.94 | FFAS-3D | | KYQSQSIYFAVALGLFAIQVSGGLLLGWIYVSPNF---------LSEILPFNIVRMLHTNSLIVWLLLGFMGAAYFVIPEESEREIHSPLLAGTLGVVVTYLF-- |
3 | 5lilA3 | 0.13 | 0.11 | 3.98 | 0.36 | HHpred | | AHKMRSLLTMLGIIIGITSVVS---VVAL--GNGSQQKILENIRGIGDTIKQTIENTTGTMKLLISSIAFISLIVGGIGVMNVSVTERTKEIGVRMAIG------ |
4 | 5gp9A2 | 0.12 | 0.12 | 4.34 | 0.89 | MUSTER | | TDVEEKLKILVNMHFKQLAADHKLAIVTQLENTELRLKINEVLKGYLNLLDELLMEGKEKGYTRLARQMIFGTLDEVVTNWVMKDCKYDLTALVKPVHQLLLGGL |
5 | 4he8F | 0.06 | 0.06 | 2.51 | 0.84 | CNFpred | | --TPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYG-TDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHA |
6 | 5nikJ3 | 0.15 | 0.14 | 4.81 | 0.56 | HHsearch-2 | | ANKMRTLLTMLGIIIGIASVVSIVVVG-----DAAKQMVLADIRSIGDKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMLVGGALGIT |
7 | 6cc4A4 | 0.09 | 0.09 | 3.31 | 0.75 | Neff-PPAS | | DWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSTPQPGWMAFLLRLVVAVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGI |
8 | 5nikJ3 | 0.16 | 0.15 | 5.06 | 0.71 | HHsearch | | ANKMRTLLTMLGIIIGIASVVSIVV-----VGDAAKQMVLADIRSIGMGTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGGALGI- |
9 | 6r6bI | 0.11 | 0.09 | 3.12 | 0.84 | SP3 | | ---MSDIVYMGNKALYLILIFSLWPVGIATVIGLSIGLLQTVTQLQEQTLPFGIKLIGVSISLLLLSGWYGEVLLSFCHEIMFLIKSG----------------- |
10 | 5gp9A2 | 0.12 | 0.12 | 4.34 | 0.64 | PROSPECTOR2 | | TDVEEKLKILVNMHFKQLAADHKLAIVTQLELRQSNTELRLKINEVLKGYLNLLDELLMEGKTRLARQMIFGTLDEVVTNWVMKDCKYDLTALVKPVHQLLLGGL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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