Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | IGETVSVQGRKITTGLVYVGTPVDDRQAALINPGLPAESAPGTPASNHHGKGYHQLPPDARGRYLDWLAAGRIGVVSEDTPLFLFLYGLEQRVLCDILPGSAPTSELATIHAELDRLIDTYRIMRRFRQRAYTLRALVRYLAQGNLHSPGKPPSPKDPYDTLPDELRYGLGVLKAHNKQIPADWALSWAVHHEQVRPP |
1 | 3wfoA2 | 0.06 | 0.06 | 2.47 | 0.72 | SPARKS-K | | -----AVERITHELFKIMKEKTAHKVIRELYEYGVLEAIIPEIGRLREVKDPLDEHTLKTLEYLEQVIEDNFGKKRVLTDVELLKWGALFHDIGKPQTFVTF-YEHDKVGAQIVREIGERLRWGDEATEFVAKLVRHHLRPFFLREAFKKGELKRRECGDIAPHLFLLSIADAMASGDEKALMETIAELESFNRNEMK |
2 | 2zufA3 | 0.10 | 0.07 | 2.42 | 0.72 | FFAS-3D | | ----------------------------------------------------YPHFARILINDIAKGDRFGSGESAPYIQYAHARCSSILRKALFKNADFTKLSERERELVIMLSKFPRIVEKPHLIAWFANELASLFNKFYMDHPVLKAEEG---------VREARLLLVMAVEQ--------VLKNALYLMGIEAP |
3 | 4ic9A | 0.08 | 0.03 | 1.22 | 0.26 | HHpred | | --------------------------------------------------------------------GVGGKSKKFGEGNFRWAI-RMANVTGREPGDIPETLDQLRLVICDLQERREKFGSSKEIDMAIVTLKVFAVAGLLNMTVS-------------------------------------------------- |
4 | 1ddtA1 | 0.13 | 0.11 | 3.88 | 0.66 | MUSTER | | -GADDVVDSFVMENFSSYHGTKPGYVDS--IQKGIQKPKSGTQGNYDDDWKGYSTDNKYDAAGYS---VDNENPLSGKAGGVVKVTYPGLTKVLALKVDN----------AETIKKELGL-SLTEPLMEQVGT-EEFIKRFGDGASRVVLSLPFAEGSSSVNNWEQAKALSVFETRGKR-GQDAMYEYMAQACA---- |
5 | 5dh9C | 0.10 | 0.08 | 2.79 | 0.63 | CNFpred | | --------------------------------------------------AAFLELPPAAFKLFVDAICWAFKHNNDVEVNGLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLT-KSGFSKQALLLMKLISLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAPHLTSEQIASFLSALTKQCKD |
6 | 1vt4I3 | 0.15 | 0.11 | 3.59 | 0.35 | HHsearch-2 | | -----------------------EYALHRSIVDHYNIPKT-FDSDIPPYLDQYSHIG-----HHLKNIEHPER--MTLFRMVFLDFRFLEQKIRHDSTAWNASGS----ILNTLQQLYKPYIC-DNDPKYERLVNAILDFLPKIE--------ENLICSK-Y---TDLL--RIAL-MAEDEAIF----EEAHKQVQRG |
7 | 5dxzA | 0.10 | 0.07 | 2.64 | 0.61 | Neff-PPAS | | ------------------------------------------------HFPSKTEIFLTLLKSTVEPSTVLAEDLAGPEMRLWAIVASEVRLLLSTKWEFAEYHSQREALTNIFRDLATEIVGDDPRAELPFHITMSVIEMRRNDGKIPSP-LSADSLPETAIMLADASLAVLGASLPADRVEKTLELIKQADA---- |
8 | 1vt4I3 | 0.12 | 0.09 | 3.02 | 0.66 | HHsearch | | --------EYALHR---------SIVDHYNIPKTFDSDDL-----IPPYLDQYSHIKNIEHPERMT-----------LFRMVFLDFRFLEQKIRHDSTAWNASG----SILNTLQQLKFPYICDPKYERLVNAILDFLPKIEE-----------NLICS-KY---TDLLR--IALM-AEDEAIFE----EAHKQVQR- |
9 | 3wb9A1 | 0.12 | 0.09 | 3.19 | 0.74 | SP3 | | -KLRVAVVG----YGNV--GRYAPDMELVGVVRRKVLAATPPELTGVRVVTDISQLTRSVPEYAEAMLRRGIH-------------------TVDSYDIHGDLADLRRRLDPVAREHAAAVISANNPALTAQVMVAALRAAARKPGCYTMIEIPVIDYLPGDREAWIRKLV--------------------------- |
10 | 5jrlA2 | 0.09 | 0.09 | 3.31 | 0.73 | PROSPECTOR2 | | QTIARTFDGYWSS-GYVLLPRGHRAADRHVTHGTDADDRFAEPANQWNYPDPSPGQSKDLMDAMHAWLRGKGPPDPETVQQKLWLFEDAVTELAAEGDGGFLEPAGYATGRSSYDAVYGGAPLSDNIERWRRSQIELFEALRAAGVAYPGATAASDETHVFYLTTNRLRAMRENIDADAPFPDHVVKWDRLKKNLPDR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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