Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | QEIGWYEEANDFMIAQGLAEFVHTSLEYETWDLLTQSVALNYLIIKYRIGELTDRDIEIWDRVKFNEKCITDCKHLLSHKEVLEFTFFYMCKRAKSLSKEQLNSDMMSLAMYCNTFVYDLYTHDLLRKYRKCTDFLSYYGPSQAVLACQRAVLSQISDRLDPLKTTHVDDYLYVMKEMMEHMTIGVMDRYGHFIGKLLSYVPFFEMIQVPQHAYYCEELLYICKGIEYKEETLRNYIFIQLHDCLPSFFRLFLKNKRYATIHDILFYWCDDEQRMSLEKKYNLSFIYEKYA |
1 | 4gyoA | 0.13 | 0.13 | 4.51 | 0.87 | SPARKS-K | | EVAVKLNEWYKLIRAEALKQEIEYDLENQDLLLYFSLMEFRHRIMLDKLMP-VKPFSDMLNEIESNLTG--LLEYYFYYFRGMYEFKIDHYKHAEEK-LEYVEDE--IEKAEFLFKVAEVYYHFSMNYASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHELTHLCSALEHARQLYYNVGHCKYSLYKEAEGYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGMYLTKFRLIHELYLLNVLTECFDLLESRQLLADAEDLLHDTAEQLEHYESAAFFYLMNIKKKLA |
2 | 3sf4A | 0.11 | 0.10 | 3.49 | 0.95 | FFAS-3D | | -KSGDCRAGVSFFEASQLGNAYFYLHDYAKAEYHHHDLASGNLNTLKVLGNFDEAIVCCQRHLDISRE-LNDKVGEARALYNLGNVYHAKGKSFGGEFPEEVRDALQAAVDFYEGNLGNTHYLDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF------LGEFETASEYYKKTLLLADRAVEAQSCYSLGNTYTLLQDYE-----KAIDYHLKHLAIAQELNDRIGEGRAC---------WSLGNAYTALGNHDQAMHFA------EKHLEISREVNLSDLQMV-- |
3 | 1ovlE | 0.13 | 0.08 | 2.75 | 0.31 | HHpred | | -----------------------SGDDTQHIQQFYDLLTGSEIIRG-------------WAEIGFADLPKADQDLLFES-AFLELFVLRLAYRSNPVHRLQCV-------RGFG---------EWIDSIVEFSSNLQN-NIDISAFSCIAALA--VTERHGLKEPKRVEELQNKIVNCLDHVTFNNGLNRPNYLSKLLGKLPELRTLCTQ-GL---QRI-----------------FYLKLEDPPPAIIDKLFLDTL---------------------------------- |
4 | 5gm6G | 0.13 | 0.13 | 4.40 | 0.70 | MUSTER | | VTFGIFNRLLPILLDRSMIKTIDRVLYQLTKPYVHKILVVAAPLLIDEDPMVRSTGQEIITNLSTVKTILTVMRPDIENEYVRNVTSRAAAVVAKALGNAACHWKARHTGIKIVQQIGILLGIGVLNHLTGLMSCIKDCLDHVPVRIVTAHTLSTLAENSYPYGIEVFNVVLEPLWKGIRS------HRGKVLSSFLKAVGSMIPLMDPEYAGYYTTEAMRIIRRFDSPDDEMKKTILLVLEEIAPEFFQKFWV-RRVALDRPLNKVVT--YTTVTLAKKLGCSYTIDKLL |
5 | 4hb4C | 0.09 | 0.08 | 3.13 | 0.97 | CNFpred | | --SETVKIIANIIKTVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIA-----TKTPKVRGLRTI--KKEILKLVETYISKAR---NLDDVVKVLVLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGIPQGVILILQSVFECTLDMINK-YPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKH----NRDVEVNGLQIA------LDLVKNIERMGNVPFANEFHKNYFF----IFVSETFFVLTDSDHKSGFSKQALLMKLISLVY |
6 | 1vt4I3 | 0.14 | 0.06 | 2.13 | 0.65 | HHsearch-2 | | -------------------------------------------------------------------------------------------------------------------------EYALH----------------RSIVD--HYNIPKTSDLIPPYLDQYFYSHIGHHLKNIEHPELFRMVDFRFLEQKIRHDSAWNASGSILNTLQLKFYKPYICDN----DPKYERLV-----NAILDFLPKIEENLICSKYTDLLRIALMAEDEA----------IFEEAH |
7 | 4gyoA | 0.07 | 0.07 | 2.93 | 0.79 | Neff-PPAS | | --AVKLNEWYKLIRAFEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMP-VKPFSDMLNEIESNLTGLLEYYFYYFRGMYEFKQAIDHYKHAEEKLEYDEIEKAEFLFKVAEVYYHIKQTYFSMNYASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHE-KALTHLCSALEHARQLEEAYMIAAAYYNVGHCKYSLAIFEEHNFQQAVQAVFSLTHIYCKEGAYDRGIKSAAEWMYLTKFRLIHELYLGSGDLNVLTECFDLLESRQLLADAEDLLHTAERFNQLE |
8 | 3s4wB2 | 0.15 | 0.11 | 3.80 | 0.62 | HHsearch | | KDIVLVFDVIKIRYEKTIFKAIERIEEHKSLDVVMKKGVEK--LLRNKIQCIQEQL---------LDSAFST------HYLVLKD----------------ICPSILLLAQTLFLFGSLLYK----------YAFKFF--D----TYCQQEVVGALVTHVCSGTEAEVDTALDVLLELIVLN-ASAMRLNAAFVKGILDYLENMSPQQIRK---IFCILSTLAFSQQGTSNHIQDDMHLVIRKQLSS---TVFKYKLIGIIGAVTMAGI-----MA--------E------ |
9 | 5w53A | 0.11 | 0.10 | 3.68 | 0.61 | SP3 | | SNIYFFDEFKRYASYHTEIKRYEDIHKTKVNSLLNEASRAIGICNRAKN-TVKGLINILENPQKFKDVKLRQYEEKKEFRGCLLNKNRKNLDQIKKI-NNEIRDLLEKLKCSCQTNVYFDMIKIYLVDFKKYENYDTFIKQYKNSYLSGVDMIRKIEKQID---NPVTINAIKFTQKEMGYI-IDRFEYHLQKVKHSIDQVTALSDGVKPKQV--------------TKNRLKEYYFNIGNYYSIFKFGKDSLNMKALIHKEKIVHNLLGELFGH-LEERIS--------- |
10 | 5h7cA | 0.13 | 0.13 | 4.43 | 1.04 | PROSPECTOR2 | | KFNKEQQNAFYEILEEQRNAFIQSLKDLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELSTDSELVNEIVKQLTDKELVIYIVKILAELAKQSTDSELVNEIVKQVIYIVKILAELAKSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQLPNLNEEQRNAFIQSLKDLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELEIVKQLAEVAKEATDKEEIVKQLAEVAKEATDKELVIYIVKSTDSELVNEIVKQLEEVAKEATVEHIEKILEELKKQS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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