>PF13105 (241 residues) MLLSGLFPVAGIMKQIPLPLSLILGGLLFFTSFGSYYTKQTSSRVCSWLAYTIFITFLMG IWDQYVTMSSLLANAKIAACIALLPAILCFRTYGITFGLLALWGALLWDVKEVQSLAVLG RMMNLLTTEKMYLLLLIAGFLVGGLFANGFRRKNDKFKQETPNVLKQKKKRMRPTFHIRI PRLPKLRMKMLTFGRTPTQSKDKRPYESMREENIHAIQQEPQHEQQEPTTLGQTRMERRR N |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | MLLSGLFPVAGIMKQIPLPLSLILGGLLFFTSFGSYYTKQTSSRVCSWLAYTIFITFLMGIWDQYVTMSSLLANAKIAACIALLPAILCFRTYGITFGLLALWGALLWDVKEVQSLAVLGRMMNLLTTEKMYLLLLIAGFLVGGLFANGFRRKNDKFKQETPNVLKQKKKRMRPTFHIRIPRLPKLRMKMLTFGRTPTQSKDKRPYESMREENIHAIQQEPQHEQQEPTTLGQTRMERRRN | |||||||||||||||||||
1 | 5tsiA | 0.08 | 0.08 | 3.10 | 0.97 | SPARKS-K | LVVSIVRPIFLAATPLAIIFIVMRKYFLRTGQQLKQLETEARSPIFSHLIMSLKGLWTIRAFERYFEALFHKTLNTHTATWFLYLSTLRWFLFRADILFVFFFTLAAWIAVEIGIIICLAMILGTFQWCVATSIAVDGMMRSVDRVFKFIDLPSESSWPHRGQI-------EVRNLTVKYTEAGHAVLKNLSFSAEGRQRGRTGSGKSSLFNALLKLVYTDGEISIDGVNWNKMPLQKWRK | |||||||||||||
2 | 4jq6A | 0.14 | 0.08 | 2.70 | 0.89 | FFAS-3D | ------------------KTSLTVAGLVTGVAFWHYLYMRTVFRYIDWLITVPLQIIEFYLIIA--VFWKLLIASLVMLIGGFIGEAWIVGMIAWLYIIYEIFVTVGWAIYPIGYAWGYFGGLNEDALNIVYNLADLINKAAFGLAIWAAAMKDKETS----------------------------------------------------------------------------------- | |||||||||||||
3 | 5tj5A | 0.18 | 0.11 | 3.64 | 0.39 | HHpred | ------------------------------------------------------------------------INAGL-PTIVTFPFMFAF-GHGFLMTLAALSLVL--NEKKINKM-KRGEIFDMAFTGR-YIILLMGVFMYTGFLYN-----GTENALLFSNSYKMKLSILANHLDIIGNFIPGLLYKWAVDWVKDG-KPAPGLLNMLI----NMFLSPGT--IDDELYPHQAKVQVF-- | |||||||||||||
4 | 6ftg51 | 0.10 | 0.09 | 3.42 | 0.74 | MUSTER | FSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISR--VAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAKCALAYFYMVSSW--GGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCL--GTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLNPQ--QFEVLFRSVISLVGFVLLTVGALLMLIIASVSEHQPTTWSSYYFDLQ---FPVGLYYCFSNLS | |||||||||||||
5 | 5xtcr | 0.15 | 0.09 | 3.07 | 0.84 | CNFpred | LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTNPLTKHMAYPFLVLSLWGMIMTSSICLRQT--DLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILS-LPLMAFWWLLASLANLAL------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5tj5A | 0.22 | 0.15 | 4.72 | 0.74 | HHsearch-2 | MKLSILMGFIHMTYSYFFSLGNFIPGLLFMQGIFGYL---SVCIVYKWAVDWVLNMLILSYPHQAKVQVFLLLMALVCIPWLLLPLHFKFHTIEFCLNYLRLWALSLA---HAQLSSVLWTMTIQIGFGAMWFLTCAVLVLMEGTHSLRLHWVESMSKPYEPFAFEYKDMEV--------------------------------------------------------------------- | |||||||||||||
7 | 5cwmA | 0.08 | 0.07 | 2.79 | 0.78 | Neff-PPAS | ----------DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQG---DPEVALRAVELVVRVAELLLRIAKESGS-------------EEALERALRVAEE-AARLAKRVLELAEKQGDPEVAELLERIARESGSEEAKERAERVREEARELQERVKELRE | |||||||||||||
8 | 2k21A | 0.17 | 0.08 | 2.73 | 0.58 | HHsearch | ---------------------------------------------MILSN---------------------------------------------TTAVTPFLTKLWQETVQQGSGL-ARRSSGDGKLEALYVLMVLGGFFTLGIMLSYIRSKKLEHSNDPFNVYIESDQEKKAYVQAR----------VL-----ES-YKSCYVVENHAIEQPNTHLPETKPS----P------------ | |||||||||||||
9 | 5ezmA | 0.12 | 0.12 | 4.12 | 0.60 | SP3 | LPWAGIFPKLWTAMRARFRPALMAGIFVFFSISRS---KLPGYIVPVIPALGILAGVALDRSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGH-ETVGRPASGADIAPQIAQKLTPEVQMLDHTLPRHPLMMVGQADTFGATVEPQRVVPDVDSFTKLWKNGQPDTYLALAPTLSMYVVARDW | |||||||||||||
10 | 5cwmA | 0.13 | 0.11 | 3.87 | 1.00 | PROSPECTOR2 | -------DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESRALRVAEEAARLAKRVLELAEKVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRV------------------------------AELLERIARESGSEEAKERAERVREEARELQERVKERER | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |