Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RLNKKLARGLPFPPASAPSTSKKNNDDGGRAEELDFERVADGIAALEKQLDPLLHAVELLKREKDKEERGLEEDYETLKTLEANARSEARNFKDSLRKTHVLVPEQRTTDADNADIKFVPDDDVGGTLFKDIEDDELRALAGQVGSHMESMRNNLQQIEGVVPQIGRSRAALQ |
1 | 4cgkA1 | 0.11 | 0.08 | 2.95 | 1.11 | FFAS-3D | | ----------------------------------QQQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQ-------TNGAVTSYINTIVNSKSITEAISRVAAEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALT |
2 | 5nenA1 | 0.10 | 0.09 | 3.44 | 1.17 | Neff-PPAS | | ------LSIVTFSPILDAVK---DKPRVAEIIALQTQLFASRRQALQSEIDGYKQSMDGIRFQLKGLQDSRGNKQIQLSSLREQMNSMKQLAADGLPRNRYLEVQRQFAEVNSSIDETVGRIGQLQKQLLESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQMADFDL- |
3 | 4nx9A1 | 0.07 | 0.06 | 2.35 | 0.88 | SPARKS-K | | ---------------------------------NGLNVATKNANDGISLAQTAEGALQQSTNILQR-RDLSLQSASERTALNGEVKQLQKELDRISNTTTFLLDGSFGVSAANEIISVGID--ESAESLNGSTAKGAQSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLK |
4 | 4wheA | 0.15 | 0.10 | 3.29 | 1.06 | FFAS-3D | | ----------------------------------DPQKLVRLIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELAEDLARAALIEKQKLTDL----------------------------IKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQAL- |
5 | 6nuwF | 0.18 | 0.14 | 4.50 | 0.44 | HHpred | | KIKKKL-RQAKFP---------------------DIEYIYSKRQFIQNRYSQELQNNERLEAILSREQNLLEETRKLCMNLKTNNKK--RLTEKLIQKD------VTF-RNDSHELNLMLNDPIKSTADVRLDKLSLLPSLKEYTKKSKELKETMGQMISDS----------- |
6 | 4cgkA | 0.09 | 0.08 | 2.82 | 0.90 | MUSTER | | -----------------------------SNLTAQQQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQAR-------SAQTNGAVTSYINTIVNSKSITEAISRVAASANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLA |
7 | 3na7A | 0.09 | 0.06 | 2.43 | 0.60 | CNFpred | | ----------------------------------EISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIK-SERELRS--------------LNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEML |
8 | 6nuwF | 0.19 | 0.14 | 4.68 | 0.60 | HHsearch-2 | | KIKKKL-RQAKFP---------------------DIEYIYSKRQFIQNRYSQELQNNERLEAILSREQNLLEETRKLCMNLKTNNKK--RLTEKLIQKD------VTF-RNDSHELNLMLNDPIKSTADVRLDKLSLLPSLKEYTKKSKELKETMGQMISDSEEI-------- |
9 | 6ewyA | 0.06 | 0.05 | 2.28 | 1.09 | Neff-PPAS | | ----------------------DPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSVSSSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQR |
10 | 6nuwF | 0.18 | 0.14 | 4.52 | 0.71 | HHsearch | | KIKKKL-RQAKFP---------------------DIEYIYSKRQFIQNRYSQELQNNERLEAILSREQNLLEETRKLCMNLKTNNKK--RLTEKLIQKD---------VTNDSHELNLMLNDPIKSTADVRLDKESLLPSLKEYTKKSKELKETMGQMISDSHEEEI------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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